Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02126 and RBAM_012580
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:50
# Commandline: needle
# -asequence dna-align/BSNT_02126___xpf.1.9828.seq
# -bsequence dna-align/RBAM_012580___xpf.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02126___xpf-RBAM_012580___xpf.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02126___xpf-RBAM_012580___xpf.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02126___xpf
# 2: RBAM_012580___xpf
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 525
# Identity: 390/525 (74.3%)
# Similarity: 390/525 (74.3%)
# Gaps: 27/525 ( 5.1%)
# Score: 1430.0
#
#
#=======================================
BSNT_02126___ 1 ATGCAAGACTTACTATTTGAATATAAACGCACGCTCAAACAAACAAGAA- 49
|||.|||||||||||||||||||||||||||||||.|||.|.||.|.||
RBAM_012580__ 1 ATGGAAGACTTACTATTTGAATATAAACGCACGCTGAAAGAGACGAAAAA 50
BSNT_02126___ 50 ----TACAATATAAACCGCTCGCTGAGGCAGATGAATCCGTGCTCTCAGC 95
||| ||.|.|||.|..||.||.||||||.|.|||||..|..|
RBAM_012580__ 51 GTGGTAC-----AAGCAGCTGGAGGAAGCCGATGAAACGGTGCTTACTTC 95
BSNT_02126___ 96 TGAAGAGCTGAAGGATAAAAAAATCATCAGAAATATGATTACTGATCTTG 145
.|||||.|||||.|||||||||||||||||||..||.|||||.|||.|.|
RBAM_012580__ 96 AGAAGAACTGAAAGATAAAAAAATCATCAGAACGATCATTACAGATGTGG 145
BSNT_02126___ 146 AATATGTAACAGAATGGCTTGAAAAAGGAAGGCAGCCCGGCATCAGACGG 195
|||||||.|..|||||||||||||||||..|||||||||||||.|||.|.
RBAM_012580__ 146 AATATGTCATCGAATGGCTTGAAAAAGGCCGGCAGCCCGGCATAAGAAGA 195
BSNT_02126___ 196 GCGATTGACCGGCGTGATGCCTACCAGCGGCTGATGATCAAGGACCCGAG 245
|||||.|||||..|.||.||.||.|||.|..||.||||.||.||.|||||
RBAM_012580__ 196 GCGATAGACCGCAGAGACGCTTATCAGAGAATGCTGATTAAAGATCCGAG 245
BSNT_02126___ 246 AATCATCGAATCATTTTC-CA-GCGCTATGATGTTTGAGCCGGACGGACA 293
||||||.|||.|.|.||| || |||| ||||||||||.||...||.|.|
RBAM_012580__ 246 AATCATAGAAACCTATTCGCAGGCGC--TGATGTTTGAACCTTCCGCAAA 293
BSNT_02126___ 294 GGTATCAGAAGAAGACAGAGAGAGAATTCGAGAAGCATTAGCCCTGTTAA 343
.||..|.||||||||||||...|||.|.||.||.|||||||||.|.||||
RBAM_012580__ 294 TGTGACTGAAGAAGACAGAATCAGACTGCGGGACGCATTAGCCGTTTTAA 343
BSNT_02126___ 344 CGGACAGAGAAAAGGAAATGTTTTTGCTGCATAAGGTAGAATGTTTTTCT 393
||||.||||||||.||||||.|..||||.||.||.|..|||||.|||||.
RBAM_012580__ 344 CGGATAGAGAAAAAGAAATGCTGCTGCTCCACAAAGCGGAATGCTTTTCA 393
BSNT_02126___ 394 TATGAACGGATCGCCGATCTTCTCGGC-----GTAAAAAAATCGACAGTG 438
|||||||||||.|||| .||| || |||||.|||||.||.||.
RBAM_012580__ 394 TATGAACGGATTGCCG-CCTT----GCTGAATGTAAAGAAATCAACCGTA 438
BSNT_02126___ 439 CAAACGACGATTAAACGGGCGAGTTTAAAGATGCAAAGACAGCAGGAAGA 488
||.||||||.|.|||||||||..|.||||.||.||||.||||||||||.|
RBAM_012580__ 439 CAGACGACGGTCAAACGGGCGCTTCTAAAAATACAAAAACAGCAGGAACA 488
BSNT_02126___ 489 AATGAATCGATCACTTGCCTGA--- 510
||..||||.|||.|.|||.|.|
RBAM_012580__ 489 AAGAAATCAATCGCCTGCTTCATAA 513
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