Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02117 and RBAM_012520

See DNA alignment / Visit BSNT_02117 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:49
# Commandline: needle
#    -asequence pep-align/BSNT_02117.1.9828.seq
#    -bsequence pep-align/RBAM_012520.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02117-RBAM_012520.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02117-RBAM_012520.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02117
# 2: RBAM_012520
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 61
# Identity:      33/61 (54.1%)
# Similarity:    42/61 (68.9%)
# Gaps:           4/61 ( 6.6%)
# Score: 164.5
# 
#
#=======================================

BSNT_02117         1 MYPIQIVFSENPIDQRHLGQSGGTISFTACGLPVFHFETQEQFQAYMMLK     50
                     |.||.|.||.||.|||.||::||:|||||||||||.|:.:.|::.|:.||
RBAM_012520        1 MQPIIIRFSSNPADQRCLGKAGGSISFTACGLPVFRFDNRLQYERYIGLK     50

BSNT_02117        51 --GEAAYNEKR     59
                       |:..|..  
RBAM_012520       51 TNGDVPYES--     59


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