Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02117 and RBAM_012520
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:50
# Commandline: needle
# -asequence dna-align/BSNT_02117.1.9828.seq
# -bsequence dna-align/RBAM_012520.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02117-RBAM_012520.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02117-RBAM_012520.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02117
# 2: RBAM_012520
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 199
# Identity: 120/199 (60.3%)
# Similarity: 120/199 (60.3%)
# Gaps: 38/199 (19.1%)
# Score: 293.5
#
#
#=======================================
BSNT_02117 1 ATGTATCC---AATCCAAATTGTTTTTAGTGAAAATC-------CCATAG 40
|||.|.|| |||| ||...|||.||....|||| |||.||
RBAM_012520 1 ATGCAGCCGATAATC---ATCCGTTTCAGCAGCAATCCGGCTGACCAGAG 47
BSNT_02117 41 ATCAGCGCCATCTCGGACAATCCGGCGGCACCATTTCGTTTACGGCATGC 90
|| .|.|.|||.||.|.|||||..|.||.||.|||||.||.|||
RBAM_012520 48 AT-------GTTTAGGAAAAGCAGGCGGTTCGATATCTTTTACCGCTTGC 90
BSNT_02117 91 GGCCTTCCGGTGTTCCACTTTGA-AACGCAAGAGCAGTTTCAA-GC-ATA 137
||.||||||||.||||..||||| ||| |.|..|||||.|.|| || |||
RBAM_012520 91 GGACTTCCGGTATTCCGATTTGATAAC-CGATTGCAGTATGAACGCTATA 139
BSNT_02117 138 CA----TGATGTTAAAGGGAGAAGCGGCGTAC--AATGAAAAACGATAA 180
.| |||.|..|||.||||| |||.| .||| ||.|| |||
RBAM_012520 140 TAGGTCTGAAGACAAACGGAGA-----CGTCCCTTATG--AATCG-TAA 180
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