Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02116 and RBAM_012510

See DNA alignment / Visit BSNT_02116 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:49
# Commandline: needle
#    -asequence pep-align/BSNT_02116___xre.1.9828.seq
#    -bsequence pep-align/RBAM_012510___xre.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02116___xre-RBAM_012510___xre.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02116___xre-RBAM_012510___xre.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02116___xre
# 2: RBAM_012510___xre
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 113
# Identity:     100/113 (88.5%)
# Similarity:   111/113 (98.2%)
# Gaps:           1/113 ( 0.9%)
# Score: 532.0
# 
#
#=======================================

BSNT_02116___      1 MIGGRLKSLRGKRTQEEIASHIGVSRARYSHYENGRSEPDYDTLQKLADY     50
                     ||||||||||||:||||:|:||||||||||||||||||||||||||||||
RBAM_012510__      1 MIGGRLKSLRGKKTQEEVANHIGVSRARYSHYENGRSEPDYDTLQKLADY     50

BSNT_02116___     51 FQVTTDYLLTGKDKKSDDDMFSDPDLQLAYRDMQDFSPESKQQAIEFINY    100
                     |:|:||||||||: .||:|||:|||||:||||||||||||||||||||||
RBAM_012510__     51 FKVSTDYLLTGKE-PSDEDMFADPDLQIAYRDMQDFSPESKQQAIEFINY     99

BSNT_02116___    101 LKEKEKNRKPKNK    113
                     ||||||||:||:|
RBAM_012510__    100 LKEKEKNRRPKHK    112


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