Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02115 and RBAM_012500
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:49
# Commandline: needle
# -asequence pep-align/BSNT_02115___xkdA.1.9828.seq
# -bsequence pep-align/RBAM_012500___xkdA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02115___xkdA-RBAM_012500___xkdA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02115___xkdA-RBAM_012500___xkdA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02115___xkdA
# 2: RBAM_012500___xkdA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 198
# Identity: 149/198 (75.3%)
# Similarity: 162/198 (81.8%)
# Gaps: 2/198 ( 1.0%)
# Score: 786.0
#
#
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BSNT_02115___ 1 MGDYLSHLEEYVKNLYGRLGITSPHHIDMLKIAKDLDIWVHFEDMGSMMV 50
|||:|:||||||||||.|:|:|:|.||||..|||:||||:||||..|||:
RBAM_012500__ 1 MGDFLTHLEEYVKNLYCRMGMTAPLHIDMQMIAKELDIWIHFEDTHSMML 50
BSNT_02115___ 51 KYDGMYSIVLNQKKSREEQWEDFGHELCHVLKHAGNHFQMNKLFRELQEF 100
|.|||||||||||||.||||:||.|||||||||.||||.|||||||||||
RBAM_012500__ 51 KRDGMYSIVLNQKKSPEEQWQDFAHELCHVLKHTGNHFHMNKLFRELQEF 100
BSNT_02115___ 101 QANQFMYHFCVPTFMLLQMELPQWRSQALATIAAVFRVTKEFADKRLDMF 150
|||.|||||||||||||.|||||.||.|:..|||.||||..||:|||::|
RBAM_012500__ 101 QANHFMYHFCVPTFMLLNMELPQRRSHAVILIAAAFRVTASFAEKRLELF 150
BSNT_02115___ 151 ERRKAGIQFQKRLAYLLSHKRPNAYEEGDQQHLQVAEEKALYHIGKNI 198
||||||||||||||.|||.||||.|.|..|.||..||||..|.|..
RBAM_012500__ 151 ERRKAGIQFQKRLACLLSDKRPNVYYESGQTHLHAAEEKTPYFIEN-- 196
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