Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02112 and RBAM_012480

See DNA alignment / Visit BSNT_02112 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:49
# Commandline: needle
#    -asequence pep-align/BSNT_02112___yjqA.1.9828.seq
#    -bsequence pep-align/RBAM_012480___yjqA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02112___yjqA-RBAM_012480___yjqA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02112___yjqA-RBAM_012480___yjqA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02112___yjqA
# 2: RBAM_012480___yjqA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 125
# Identity:     113/125 (90.4%)
# Similarity:   117/125 (93.6%)
# Gaps:           0/125 ( 0.0%)
# Score: 561.0
# 
#
#=======================================

BSNT_02112___      1 MGFIDGLLGNASTLSTAAVKEELAHILLEGEKVEAAFKLVRDLIVFTDKR     50
                     ||||:||||||||:|||..|.|||.||||||.|.||||||||:|||||||
RBAM_012480__      1 MGFINGLLGNASTISTAEAKAELARILLEGENVNAAFKLVRDIIVFTDKR     50

BSNT_02112___     51 LILVDKQGITGKKTEFQSIPYKSISRFSVETAGRFDLDSELKIWISGAEL    100
                     ||||||||:||||||.||||||||||||||||||||||||||||||||||
RBAM_012480__     51 LILVDKQGLTGKKTEIQSIPYKSISRFSVETAGRFDLDSELKIWISGAEL    100

BSNT_02112___    101 PAVSKQFKKDESIYDIQKVLAAVCM    125
                     ||||||||||||||||||.||||||
RBAM_012480__    101 PAVSKQFKKDESIYDIQKALAAVCM    125


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