Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02112 and RBAM_012480
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:49
# Commandline: needle
# -asequence dna-align/BSNT_02112___yjqA.1.9828.seq
# -bsequence dna-align/RBAM_012480___yjqA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02112___yjqA-RBAM_012480___yjqA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02112___yjqA-RBAM_012480___yjqA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02112___yjqA
# 2: RBAM_012480___yjqA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 378
# Identity: 323/378 (85.4%)
# Similarity: 323/378 (85.4%)
# Gaps: 0/378 ( 0.0%)
# Score: 1395.0
#
#
#=======================================
BSNT_02112___ 1 ATGGGGTTTATTGATGGATTACTCGGCAATGCGTCAACACTGTCAACGGC 50
|||||.||.||..|||||||.||.|||||||||||.|||.|.||.|||||
RBAM_012480__ 1 ATGGGATTCATCAATGGATTGCTGGGCAATGCGTCGACAATATCGACGGC 50
BSNT_02112___ 51 TGCTGTAAAAGAAGAGCTTGCTCATATTTTACTTGAGGGTGAGAAGGTTG 100
||..|.|||||.|||.||.||||.||||.|.||.||.||||||||.||..
RBAM_012480__ 51 TGAAGCAAAAGCAGAACTGGCTCGTATTCTGCTGGAAGGTGAGAATGTCA 100
BSNT_02112___ 101 AAGCCGCGTTTAAGCTGGTTCGCGATTTGATTGTCTTCACTGACAAGCGG 150
|.|||||.||||||||.||.||.|||.|.||||||||.||.||.|||||.
RBAM_012480__ 101 ACGCCGCATTTAAGCTTGTCCGAGATATCATTGTCTTTACGGATAAGCGT 150
BSNT_02112___ 151 CTTATTCTTGTGGACAAGCAGGGAATCACAGGCAAGAAAACGGAGTTTCA 200
|||||||||||.||.||.||||||.|||||||.||||||||||||.||||
RBAM_012480__ 151 CTTATTCTTGTTGATAAACAGGGACTCACAGGGAAGAAAACGGAGATTCA 200
BSNT_02112___ 201 ATCGATTCCGTACAAAAGCATTTCCAGATTCAGCGTGGAAACGGCCGGCC 250
|||.|||||||||||.||||||||||||||||||||.|||||.|||||||
RBAM_012480__ 201 ATCCATTCCGTACAAGAGCATTTCCAGATTCAGCGTAGAAACCGCCGGCC 250
BSNT_02112___ 251 GCTTTGACCTCGATTCAGAGCTGAAAATTTGGATCTCCGGCGCAGAGCTT 300
||||||||||.|||||||||||||||||||||||.||.|||||.||.|||
RBAM_012480__ 251 GCTTTGACCTTGATTCAGAGCTGAAAATTTGGATTTCAGGCGCGGAACTT 300
BSNT_02112___ 301 CCTGCCGTCTCAAAGCAGTTTAAAAAAGATGAGAGCATTTATGATATTCA 350
||.||.||||||||||||||||||||||||||.|||||||||||||||||
RBAM_012480__ 301 CCCGCTGTCTCAAAGCAGTTTAAAAAAGATGAAAGCATTTATGATATTCA 350
BSNT_02112___ 351 AAAGGTGCTTGCCGCAGTTTGTATGTAA 378
|||||..|||||||||||||||||||||
RBAM_012480__ 351 AAAGGCCCTTGCCGCAGTTTGTATGTAA 378
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