Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02111 and RBAM_012470

See DNA alignment / Visit BSNT_02111 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:49
# Commandline: needle
#    -asequence pep-align/BSNT_02111___xlyB.1.9828.seq
#    -bsequence pep-align/RBAM_012470___xlyB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02111___xlyB-RBAM_012470___xlyB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02111___xlyB-RBAM_012470___xlyB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02111___xlyB
# 2: RBAM_012470___xlyB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 317
# Identity:     266/317 (83.9%)
# Similarity:   288/317 (90.9%)
# Gaps:           0/317 ( 0.0%)
# Score: 1407.0
# 
#
#=======================================

BSNT_02111___      1 MSIPVKKNLVSEAKYALKCPNAMSAEYITIHNTANDASAANEISYMIGNT     50
                     |.|.|||.|||..||||||||.|:.|||||||||||||||||||||.||:
RBAM_012470__      1 MGIEVKKRLVSADKYALKCPNPMTPEYITIHNTANDASAANEISYMTGNS     50

BSNT_02111___     51 SSTSFHFAVDDQEVIQGLPLNRNAWHTGDGTNGPGNRKSIGVEICYSKSG    100
                     .|||:||||||:|||||:||:|||||:||||||.||||||.:||||||||
RBAM_012470__     51 ESTSYHFAVDDKEVIQGIPLDRNAWHSGDGTNGTGNRKSIAIEICYSKSG    100

BSNT_02111___    101 GPKYEAAEALAISFVAQLLKERGWGIDRVRKHQDWNGKYCPHRILSEGRW    150
                     |.:|.|||.|||:|.|||||||||||||:|||||||||||||||||||||
RBAM_012470__    101 GERYRAAEELAIAFAAQLLKERGWGIDRIRKHQDWNGKYCPHRILSEGRW    150

BSNT_02111___    151 DQVKAAIEKELNGGLSAKKAAVSSSASVYHVKKGDTLSGIAASHGVSVKT    200
                     |:|||.|||:|:|.:.||||::|||||.||||||||||.||||||||||:
RBAM_012470__    151 DEVKAKIEKKLSGSMPAKKASISSSASEYHVKKGDTLSEIAASHGVSVKS    200

BSNT_02111___    201 LQSINHITDPNYIKVGQVIKLPQTASASKSHAASSYPLPSGVIKVTSPLT    250
                     |||||||||||:|.|||||||.||.|:|||.|.|||||||||||||.|||
RBAM_012470__    201 LQSINHITDPNHITVGQVIKLAQTGSSSKSQAVSSYPLPSGVIKVTKPLT    250

BSNT_02111___    251 KGTKVKQVQTALAALYFYPDKGAKNHGVDGVYGPKTANAVKRFQSVSGLT    300
                     |||.|||||.||:||||||||||||||.||||||||||||||||||||||
RBAM_012470__    251 KGTNVKQVQNALSALYFYPDKGAKNHGADGVYGPKTANAVKRFQSVSGLT    300

BSNT_02111___    301 ADGIYGPKTKAKLEEKL    317
                     ||||||||||||:||||
RBAM_012470__    301 ADGIYGPKTKAKIEEKL    317


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