Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02111 and RBAM_012470
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:49
# Commandline: needle
# -asequence dna-align/BSNT_02111___xlyB.1.9828.seq
# -bsequence dna-align/RBAM_012470___xlyB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02111___xlyB-RBAM_012470___xlyB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02111___xlyB-RBAM_012470___xlyB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02111___xlyB
# 2: RBAM_012470___xlyB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 962
# Identity: 757/962 (78.7%)
# Similarity: 757/962 (78.7%)
# Gaps: 16/962 ( 1.7%)
# Score: 2945.0
#
#
#=======================================
BSNT_02111___ 1 GTGAGCATTCCAGTAAAGAAAAATTTGGTTTCTGAGGCGAAATACGCGTT 50
|||.|.|||..|||.||.|||....|.||.||.|..|..|||||.|||||
RBAM_012470__ 1 GTGGGGATTGAAGTGAAAAAACGGCTCGTATCGGCTGATAAATATGCGTT 50
BSNT_02111___ 51 GAAGTGTCCTAATGCAATGTCCGCTGAATACATTACCATTCACAACACGG 100
.||.|||||.|||.|.|||.|..|.||.||.|||||||||||.|||||||
RBAM_012470__ 51 AAAATGTCCGAATCCGATGACGCCGGAGTATATTACCATTCATAACACGG 100
BSNT_02111___ 101 CAAACGATGCGTCCGCGGCCAATGAAATCAGCTATATGATCGGGAACACA 150
|||||||.||.|||||.||.|||||||||||||||||||..||.|||
RBAM_012470__ 101 CAAACGACGCATCCGCCGCTAATGAAATCAGCTATATGACTGGAAAC--- 147
BSNT_02111___ 151 AGC---TCGACAAGCTTTCATTTTGCGGTCGATGATCAAGAGGTAATTCA 197
||| ||.||.||||.||||||||||||.|||||..||||.||.||.||
RBAM_012470__ 148 AGCGAATCAACGAGCTATCATTTTGCGGTTGATGACAAAGAAGTGATCCA 197
BSNT_02111___ 198 AGGTCTGCCGCTTAACCGAAACGCTTGGCACACTGGTGACGGCACAAACG 247
.||..|.|||.|..||||.||.||.|||||..|.||.||||||||.||||
RBAM_012470__ 198 GGGAATTCCGTTGGACCGGAATGCCTGGCATTCGGGAGACGGCACGAACG 247
BSNT_02111___ 248 GTCCGGGAAACCGCAAATCAATCGGCGTTGAGATTTGCTACAGCAAATCG 297
||.|.||||||||.||.||.||.|...|.||.||.||.||||||||.||.
RBAM_012470__ 248 GTACCGGAAACCGAAAGTCGATTGCTATAGAAATCTGTTACAGCAAGTCA 297
BSNT_02111___ 298 GGAGGCCCGAA--GTATGAG-GCAGCTGAAGCCTTGGCGATTTCATTTGT 344
||.|| |||| ||| .|| ||.||.||||...||||||||.|.||||.
RBAM_012470__ 298 GGCGG--CGAACGGTA-CAGAGCCGCAGAAGAACTGGCGATTGCGTTTGC 344
BSNT_02111___ 345 TGCACAGCTTTTGAAGGAGCGCGGCTGGGGCATCGATCGTGTGAGAAAGC 394
.||.|||||||||||.||.||.||||||||.||.||..|..|.|||||||
RBAM_012470__ 345 GGCGCAGCTTTTGAAAGAACGGGGCTGGGGGATTGACAGAATCAGAAAGC 394
BSNT_02111___ 395 ACCAGGACTGGAACGGAAAGTATTGCCCGCACCGCATTTTATCAGAGGGG 444
|.||||||||||||||||||||.|||||||||||||||||.||.||.||.
RBAM_012470__ 395 ATCAGGACTGGAACGGAAAGTACTGCCCGCACCGCATTTTGTCTGAAGGC 444
BSNT_02111___ 445 CGCTGGGATCAAGTGAAGGCGGCAATTGAAAAGGAATTAAACGGGGGCTT 494
|||||||||.|||||||||||...|||||||||.||||||.|||..| |
RBAM_012470__ 445 CGCTGGGATGAAGTGAAGGCGAAGATTGAAAAGAAATTAAGCGGAAG--T 492
BSNT_02111___ 495 AT--CAGCTAAAAAAGCTGCAGTCTCTTCTTCAGCGTCTGTATATCATGT 542
|| |.||.||||||||..|..|.||||||||.|||||||.|||.|||||
RBAM_012470__ 493 ATGCCGGCGAAAAAAGCCTCTATTTCTTCTTCCGCGTCTGAATACCATGT 542
BSNT_02111___ 543 GAAAAAAGGCGACACATTGTCAGGGATTGCCGCATCACACGGAGTCAGTG 592
|||||||||||||||.||.||.|..||.||||||||.|||||.|||||.|
RBAM_012470__ 543 GAAAAAAGGCGACACCTTATCGGAAATCGCCGCATCGCACGGTGTCAGCG 592
BSNT_02111___ 593 TGAAAACGCTGCAAAGCATCAATCATATTACTGACCCGAATTACATTAAA 642
|.|||.||||||||||||||||.|||||.||.||.||||||.||||||.|
RBAM_012470__ 593 TAAAATCGCTGCAAAGCATCAACCATATCACAGATCCGAATCACATTACA 642
BSNT_02111___ 643 GTCGGACAAGTGATCAAACTGCCTCAGACGGCATCTGCTTCTAAAAGCCA 692
|||||||||||||||||.||..|||||||||..|||.||||.|||||.||
RBAM_012470__ 643 GTCGGACAAGTGATCAAGCTCGCTCAGACGGGTTCTTCTTCAAAAAGTCA 692
BSNT_02111___ 693 TGCCGCATCCTCATATCCGCTCCCATCCGGCGTGATCAAAGTGACAAGCC 742
.||.|..||.||.||||||||.|||||.||.||||||||||||||.|..|
RBAM_012470__ 693 GGCTGTGTCTTCCTATCCGCTTCCATCAGGTGTGATCAAAGTGACGAAAC 742
BSNT_02111___ 743 CGCTGACGAAAGGGACAAAAGTAAAGCAGGTGCAGACCGCTTTAGCCGCT 792
|||||||||||||||||||.|||||.||.|||||.|.|||||||.|||||
RBAM_012470__ 743 CGCTGACGAAAGGGACAAACGTAAAACAAGTGCAAAACGCTTTATCCGCT 792
BSNT_02111___ 793 CTTTATTTTTATCCTGATAAAGGAGCGAAAAATCACGGCGTTGACGGCGT 842
||||||||||||||.|||||||||||.||||||||.||.|..||||||||
RBAM_012470__ 793 CTTTATTTTTATCCCGATAAAGGAGCAAAAAATCATGGGGCGGACGGCGT 842
BSNT_02111___ 843 TTATGGCCCGAAAACAGCAAATGCAGTGAAACGTTTTCAGTCTGTCAGCG 892
|||.||.||||||||.||||||||.||.|||||||||||.||.|||||||
RBAM_012470__ 843 TTACGGTCCGAAAACGGCAAATGCCGTAAAACGTTTTCAATCCGTCAGCG 892
BSNT_02111___ 893 GTTTAACGGCTGATGGGATTTACGGTCCGAAAACGAAAGCGAAGCTGGAG 942
|.||||||||.||.||.||||||||.|||||||||||.|||||..|.||.
RBAM_012470__ 893 GGTTAACGGCAGACGGAATTTACGGCCCGAAAACGAAGGCGAAAATTGAA 942
BSNT_02111___ 943 GAAAAGCTGTAA 954
|||||.||||||
RBAM_012470__ 943 GAAAAACTGTAA 954
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