Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02107 and RBAM_012450
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:49
# Commandline: needle
# -asequence pep-align/BSNT_02107___rapA.1.9828.seq
# -bsequence pep-align/RBAM_012450___rapA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02107___rapA-RBAM_012450___rapA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02107___rapA-RBAM_012450___rapA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02107___rapA
# 2: RBAM_012450___rapA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 376
# Identity: 337/376 (89.6%)
# Similarity: 355/376 (94.4%)
# Gaps: 0/376 ( 0.0%)
# Score: 1775.0
#
#
#=======================================
BSNT_02107___ 1 MKQTIPSSYVGLKINEWYTHIRQFHVAEAERVKLEVEREIEDMEEDQDLL 50
||||||||:|||||||||||||||||.||||||.||||||||||||||||
RBAM_012450__ 1 MKQTIPSSFVGLKINEWYTHIRQFHVLEAERVKREVEREIEDMEEDQDLL 50
BSNT_02107___ 51 LYYSLMEFRHRVMLDYIKPFGEDTSQLEFSELLEDIEGNQYKLTGLLEYY 100
|||||||||||||||||||..||.||.||||||||||||||||||||:||
RBAM_012450__ 51 LYYSLMEFRHRVMLDYIKPLKEDPSQPEFSELLEDIEGNQYKLTGLLDYY 100
BSNT_02107___ 101 FNFFRGMYEFKQKMFVSAMMYYKRAEKNLALVSDDIEKAEFAFKMAEIFY 150
|||||||||||||||::|||||||||||||||||||||||||||||||||
RBAM_012450__ 101 FNFFRGMYEFKQKMFLNAMMYYKRAEKNLALVSDDIEKAEFAFKMAEIFY 150
BSNT_02107___ 151 NLKQTYVSMSYAVQALETYQMYETYTVRRIQCEFVIAGNYDDMQYPERAL 200
||||||||||||||||||||.||||.||||||||||||||||||||||||
RBAM_012450__ 151 NLKQTYVSMSYAVQALETYQSYETYNVRRIQCEFVIAGNYDDMQYPERAL 200
BSNT_02107___ 201 PHLELALDLAKKEGNPRLISSALYNLGNCYEKMGELQKAAEYFEKSVSIC 250
|||||||||||:||||||||||||||||||||||:|.|||||||.|||||
RBAM_012450__ 201 PHLELALDLAKQEGNPRLISSALYNLGNCYEKMGDLSKAAEYFETSVSIC 250
BSNT_02107___ 251 KSEKFDNLPHSIYSLTQVLYKQKNDAEAQKKYREGLEIARQYSDELFVEL 300
:|||||||||||||||||||||...|||:|:||.||.|||:|:|||||.|
RBAM_012450__ 251 RSEKFDNLPHSIYSLTQVLYKQNTTAEAEKQYRLGLSIAREYNDELFVNL 300
BSNT_02107___ 301 FQFLHALYGKNIDTESVSHTFQFLEEHMLYPYIEELAHDAAQFYIENGQP 350
||||||||||.:|..||.|||.||||||||||:||||||||:||:::|||
RBAM_012450__ 301 FQFLHALYGKEMDNASVRHTFDFLEEHMLYPYVEELAHDAAKFYMKHGQP 350
BSNT_02107___ 351 EKALSFYEKMVHAQKQIQRGDCLYEI 376
||||:|||||||||||||||||||||
RBAM_012450__ 351 EKALTFYEKMVHAQKQIQRGDCLYEI 376
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