Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02101 and RBAM_012440

See DNA alignment / Visit BSNT_02101 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:49
# Commandline: needle
#    -asequence pep-align/BSNT_02101___yjoA.1.9828.seq
#    -bsequence pep-align/RBAM_012440___yjoA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02101___yjoA-RBAM_012440___yjoA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02101___yjoA-RBAM_012440___yjoA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02101___yjoA
# 2: RBAM_012440___yjoA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 155
# Identity:     120/155 (77.4%)
# Similarity:   135/155 (87.1%)
# Gaps:           1/155 ( 0.6%)
# Score: 604.0
# 
#
#=======================================

BSNT_02101___      1 MSQSNQIVSHFLSHRNVTNELAEKISKDHYSYKPAETSMSAEELVKHILT     50
                     |:..||:|||||||||||.|||||||::||.||||||||||:|||||::.
RBAM_012440__      1 MTAQNQLVSHFLSHRNVTIELAEKISREHYDYKPAETSMSAQELVKHMVY     50

BSNT_02101___     51 SFHLFANVIKEGNASPFQNK-QEETETDLNVLAKTYTEKTAAILEQLTEE     99
                     ||.:.||||.:||||..||| :||.||||..||:|.||||..||.|||||
RBAM_012440__     51 SFLMLANVINDGNASAIQNKPKEEAETDLVKLAETCTEKTTDILSQLTEE    100

BSNT_02101___    100 QLDREIDLTSAFGRKVTGRALLQLAMEHEIHHKGNLFVYVREMGHTELPF    149
                     ||:||||||::|||||||.|||||||||||||||||||||||||||||||
RBAM_012440__    101 QLNREIDLTASFGRKVTGAALLQLAMEHEIHHKGNLFVYVREMGHTELPF    150

BSNT_02101___    150 YQQRM    154
                     |||:.
RBAM_012440__    151 YQQKS    155


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