Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02098 and RBAM_012410
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:48
# Commandline: needle
# -asequence pep-align/BSNT_02098___uxaB.1.9828.seq
# -bsequence pep-align/RBAM_012410___uxaB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02098___uxaB-RBAM_012410___uxaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02098___uxaB-RBAM_012410___uxaB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02098___uxaB
# 2: RBAM_012410___uxaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 481
# Identity: 324/481 (67.4%)
# Similarity: 391/481 (81.3%)
# Gaps: 1/481 ( 0.2%)
# Score: 1734.0
#
#
#=======================================
BSNT_02098___ 1 MQKLNKNVYDHYTRYPEKILQFGEGNFLRGFVDWQIDQLNQHTDFNGSVA 50
|:||||.:...|.:||||:||||||||||.|.|||||||||.|||||||.
RBAM_012410__ 1 MRKLNKKMCGEYIQYPEKVLQFGEGNFLRAFADWQIDQLNQLTDFNGSVV 50
BSNT_02098___ 51 VVQPRGSEKIKRLNQQDGLYTLFLQGMKDGEAVNEHMIINSISRGIDLFS 100
.|||||||||||||:||||:||||||:|||:...||.|:.||||||||||
RBAM_012410__ 51 AVQPRGSEKIKRLNEQDGLFTLFLQGIKDGKPAEEHTIVKSISRGIDLFS 100
BSNT_02098___ 101 DYEAYKELASSERLRFIISNTTEAGIVCDEKDRLEDRPQKTFPGKLTAFL 150
||:::|.||:.|.|||||||||||||..::.|||||||||||||||.|||
RBAM_012410__ 101 DYDSFKRLAAQEELRFIISNTTEAGITFEKGDRLEDRPQKTFPGKLAAFL 150
BSNT_02098___ 151 YFRFQAFKGDQTKGCVLIPCELIENNGEKLKETVLHYAGLWKLEEGFTQW 200
|||::||.||..|||:::||||:|.||.|||..||.|||||:||..||||
RBAM_012410__ 151 YFRYKAFAGDAEKGCIMLPCELVEENGRKLKAAVLQYAGLWELEPDFTQW 200
BSNT_02098___ 201 IHEANTFCNSLVDRIVPGFPVDSIDEITADLGYQDDLIVVGEQYYLWVIE 250
||:||.|||:||||||||||||:.:|:|..|||:|.|:||||.|||||||
RBAM_012410__ 201 IHDANIFCNTLVDRIVPGFPVDTAEELTDFLGYEDRLLVVGEHYYLWVIE 250
BSNT_02098___ 251 GPDWIGKELPFAAAGLHTKIVSDLTPYRTKKVRILNGAHTAMTPVALLYG 300
||:.:..|||||.|||:..|.||||.|||||||||||||||:.|||||||
RBAM_012410__ 251 GPEQLQNELPFAEAGLNALITSDLTSYRTKKVRILNGAHTALAPVALLYG 300
BSNT_02098___ 301 LKTVRDAVEHPEVGRFIRELIDDEILPVLKMEGLSQYADDVLNRFKNPYI 350
|:|||:|.||...||||.|||::||||||:|||::|||.|||.|||||||
RBAM_012410__ 301 LQTVREAAEHEVTGRFIEELINEEILPVLQMEGVTQYAADVLQRFKNPYI 350
BSNT_02098___ 351 KHYLESIALSSVSKFKTRNLPTLKEYAEQKGQLPERLVFSFSALLYFYHN 400
:|||:||.|::.:|||||||||||.|.||:|:|||:|||||||::|.|.|
RBAM_012410__ 351 QHYLQSITLNAAAKFKTRNLPTLKAYIEQEGRLPEKLVFSFSAMIYSYWN 400
BSNT_02098___ 401 NETL-QDDPAVLQFFKEVWCQEDDDMLRIASRVLGEQRLWGADLNEIPKL 449
.... .|...||..|:....:..|||.:.||.:|||:||||.:||.:|.|
RBAM_012410__ 401 GPNKPADGEGVLNRFQMARSRCKDDMFQAASSILGEERLWGKNLNHLPGL 450
BSNT_02098___ 450 TDRVAVYLNLIHELGMQRALEQYCIQEGEVR 480
|:|.|.:|::||:.||:.||.:.|.::|||:
RBAM_012410__ 451 TERTAFFLSVIHKRGMKHALHECCGKKGEVK 481
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