Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02097 and RBAM_012400
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:48
# Commandline: needle
# -asequence pep-align/BSNT_02097___exuR.1.9828.seq
# -bsequence pep-align/RBAM_012400___exuR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02097___exuR-RBAM_012400___exuR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02097___exuR-RBAM_012400___exuR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02097___exuR
# 2: RBAM_012400___exuR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity: 274/333 (82.3%)
# Similarity: 312/333 (93.7%)
# Gaps: 1/333 ( 0.3%)
# Score: 1436.0
#
#
#=======================================
BSNT_02097___ 1 MVTIKDIAKLANVSHTTVSRALNNSPYIKEHTKKKILELAEQLNYTPNVN 50
|||||||||||||||||||||||.|||||||||:||||||.|||||||||
RBAM_012400__ 1 MVTIKDIAKLANVSHTTVSRALNGSPYIKEHTKQKILELASQLNYTPNVN 50
BSNT_02097___ 51 AKSLAMQKSHTIGLFFTSITNGTSHSFFADTIKGVNQAISEDYNLYVRGI 100
||||||||||||||||||||||||||||:|||||||:.|||:|||:||.|
RBAM_012400__ 51 AKSLAMQKSHTIGLFFTSITNGTSHSFFSDTIKGVNRTISEEYNLFVRAI 100
BSNT_02097___ 101 DDLKNYDSVTPMRYDGIILMSQSDIDNSFIYHIREKNIPLVVLNRDIDDR 150
||||:::::|||||||||||||||.|||||||||||||||||||||||||
RBAM_012400__ 101 DDLKSFETITPMRYDGIILMSQSDSDNSFIYHIREKNIPLVVLNRDIDDR 150
BSNT_02097___ 151 TITNILSNDKEGSQEAVEYFIQSGHQDIAIIEGIEGFKSSQQRKEGYLSA 200
:||||||||||||::||:..|.:||:|||||||.|||:|:.|||||||::
RBAM_012400__ 151 SITNILSNDKEGSRQAVDCLIANGHRDIAIIEGKEGFRSTSQRKEGYLTS 200
BSNT_02097___ 201 LIQHHIPIKHEYSVKGQYDMESGFQAMERLLALPNPPTAVFCSNDDMAIG 250
||.|.|||||||||||:||||||.||||:||||.:|||||||||||||||
RBAM_012400__ 201 LIDHSIPIKHEYSVKGRYDMESGSQAMEKLLALQSPPTAVFCSNDDMAIG 250
BSNT_02097___ 251 AMNAIFAKGLRVPDDISVIGFDDIGFSQYITPRLTTVKRPVEKISVLGAQ 300
||||||||||.||:|||||||||||.|||:||||:|||||||.||:|||:
RBAM_012400__ 251 AMNAIFAKGLNVPEDISVIGFDDIGISQYMTPRLSTVKRPVENISILGAE 300
BSNT_02097___ 301 KLLSLISEPETKAEKILENTKFMVRDSVRRLTT 333
|:|:||::|:|.||||.|||:.|:|||:::||
RBAM_012400__ 301 KILALIADPDTAAEKIYENTEVMIRDSIKKLT- 332
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