Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02097 and RBAM_012400

See DNA alignment / Visit BSNT_02097 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:48
# Commandline: needle
#    -asequence pep-align/BSNT_02097___exuR.1.9828.seq
#    -bsequence pep-align/RBAM_012400___exuR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02097___exuR-RBAM_012400___exuR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02097___exuR-RBAM_012400___exuR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02097___exuR
# 2: RBAM_012400___exuR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity:     274/333 (82.3%)
# Similarity:   312/333 (93.7%)
# Gaps:           1/333 ( 0.3%)
# Score: 1436.0
# 
#
#=======================================

BSNT_02097___      1 MVTIKDIAKLANVSHTTVSRALNNSPYIKEHTKKKILELAEQLNYTPNVN     50
                     |||||||||||||||||||||||.|||||||||:||||||.|||||||||
RBAM_012400__      1 MVTIKDIAKLANVSHTTVSRALNGSPYIKEHTKQKILELASQLNYTPNVN     50

BSNT_02097___     51 AKSLAMQKSHTIGLFFTSITNGTSHSFFADTIKGVNQAISEDYNLYVRGI    100
                     ||||||||||||||||||||||||||||:|||||||:.|||:|||:||.|
RBAM_012400__     51 AKSLAMQKSHTIGLFFTSITNGTSHSFFSDTIKGVNRTISEEYNLFVRAI    100

BSNT_02097___    101 DDLKNYDSVTPMRYDGIILMSQSDIDNSFIYHIREKNIPLVVLNRDIDDR    150
                     ||||:::::|||||||||||||||.|||||||||||||||||||||||||
RBAM_012400__    101 DDLKSFETITPMRYDGIILMSQSDSDNSFIYHIREKNIPLVVLNRDIDDR    150

BSNT_02097___    151 TITNILSNDKEGSQEAVEYFIQSGHQDIAIIEGIEGFKSSQQRKEGYLSA    200
                     :||||||||||||::||:..|.:||:|||||||.|||:|:.|||||||::
RBAM_012400__    151 SITNILSNDKEGSRQAVDCLIANGHRDIAIIEGKEGFRSTSQRKEGYLTS    200

BSNT_02097___    201 LIQHHIPIKHEYSVKGQYDMESGFQAMERLLALPNPPTAVFCSNDDMAIG    250
                     ||.|.|||||||||||:||||||.||||:||||.:|||||||||||||||
RBAM_012400__    201 LIDHSIPIKHEYSVKGRYDMESGSQAMEKLLALQSPPTAVFCSNDDMAIG    250

BSNT_02097___    251 AMNAIFAKGLRVPDDISVIGFDDIGFSQYITPRLTTVKRPVEKISVLGAQ    300
                     ||||||||||.||:|||||||||||.|||:||||:|||||||.||:|||:
RBAM_012400__    251 AMNAIFAKGLNVPEDISVIGFDDIGISQYMTPRLSTVKRPVENISILGAE    300

BSNT_02097___    301 KLLSLISEPETKAEKILENTKFMVRDSVRRLTT    333
                     |:|:||::|:|.||||.|||:.|:|||:::|| 
RBAM_012400__    301 KILALIADPDTAAEKIYENTEVMIRDSIKKLT-    332


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