Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02088 and RBAM_012390
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:48
# Commandline: needle
# -asequence pep-align/BSNT_02088___yjmB.1.9828.seq
# -bsequence pep-align/RBAM_012390___yjmB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02088___yjmB-RBAM_012390___yjmB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02088___yjmB-RBAM_012390___yjmB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02088___yjmB
# 2: RBAM_012390___yjmB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 465
# Identity: 357/465 (76.8%)
# Similarity: 401/465 (86.2%)
# Gaps: 10/465 ( 2.2%)
# Score: 1847.5
#
#
#=======================================
BSNT_02088___ 1 -----MRTELANKVVSVETEKRLSLKEKMSYGFGDFGNGFMFDLGQIYLL 45
:.|..|.|| .|.:||||||:|||||||||||||||||||||
RBAM_012390__ 1 MSNVPVVTAPAAKV----KEHKLSLKEKVSYGFGDFGNGFMFDLGQIYLL 46
BSNT_02088___ 46 KYFTDVAGIPAAMAGGIFLVSKLFAAITDPIVGSSIDYRKNIGKRGKFRP 95
|:||||||||||.||.||||||||||:|||||||:|||||.||.||||||
RBAM_012390__ 47 KFFTDVAGIPAAFAGSIFLVSKLFAAVTDPIVGSAIDYRKKIGPRGKFRP 96
BSNT_02088___ 96 YLLIGSIVLAVLTVLIFLSPNVSTTGKLIYAYASYMIWGIGYSFVNIPYG 145
|||.|||:|||:|||||:||:||.|.||:|||||||:||:.|||||||||
RBAM_012390__ 97 YLLFGSIILAVMTVLIFVSPDVSVTWKLVYAYASYMLWGVAYSFVNIPYG 146
BSNT_02088___ 146 SLGAAMTQNSEDRTSISTFRQIGSLGALFITSVAVMPLLVKFDNPKVGYP 195
|||||:||::||||::|.||||||||||.||||.|:|:||.|||..:|||
RBAM_012390__ 147 SLGAAITQDAEDRTALSAFRQIGSLGALLITSVIVIPILVHFDNVHIGYP 196
BSNT_02088___ 196 VVMGLFAALGVFWFYICYRNCKERIVISEAPKEKLTLSSVVKTFITNKPL 245
.|||:.|.:|:..|.||||||||||::.|||||||::.||.|.||.||||
RBAM_012390__ 197 AVMGMMAVIGIAGFMICYRNCKERIIVREAPKEKLSVMSVFKCFIGNKPL 246
BSNT_02088___ 246 LTLVLMTIFSISAYNIKSAMLVYFAQYNLGNVELMAYMNFIIIGSSFLGV 295
||:|.||||||||||||||||||||||||.|.|||:||:|||||||||||
RBAM_012390__ 247 LTVVFMTIFSISAYNIKSAMLVYFAQYNLNNAELMSYMSFIIIGSSFLGV 296
BSNT_02088___ 296 VFLPKLVKMFGKKRTAMIGFGISVAADLINFMLPSNVYVFTILASIAFIG 345
:|:|||||.||||:|.||||.:|.|||.:||.||||||:||.||||||||
RBAM_012390__ 297 LFMPKLVKRFGKKQTVMIGFAVSAAADALNFCLPSNVYIFTALASIAFIG 346
BSNT_02088___ 346 ISIPNGITWALVSDIIDYGEWKSGERKEATTYSLFNFSRKLAQSLSGFLS 395
||||||||||||||||||||||:|||||||||||||||||||||||||||
RBAM_012390__ 347 ISIPNGITWALVSDIIDYGEWKTGERKEATTYSLFNFSRKLAQSLSGFLS 396
BSNT_02088___ 396 GIGLGIIGYVPNAVQTAQALIGIKALLLLYPAIALALAMFIIGFLYKLTD 445
||||.:|||:|||.||...|||||.|||||||.|||.||.|||.:|||||
RBAM_012390__ 397 GIGLSVIGYIPNASQTKGTLIGIKGLLLLYPAFALACAMLIIGLMYKLTD 446
BSNT_02088___ 446 QQHAQIVQDLHQKS- 459
:|||::|||||...
RBAM_012390__ 447 RQHAELVQDLHHAKP 461
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