Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02087 and RBAM_012380
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:47
# Commandline: needle
# -asequence pep-align/BSNT_02087___uxaC.1.9828.seq
# -bsequence pep-align/RBAM_012380___uxaC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02087___uxaC-RBAM_012380___uxaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02087___uxaC-RBAM_012380___uxaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02087___uxaC
# 2: RBAM_012380___uxaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 479
# Identity: 357/479 (74.5%)
# Similarity: 405/479 (84.6%)
# Gaps: 14/479 ( 2.9%)
# Score: 1952.0
#
#
#=======================================
BSNT_02087___ 1 MKDGEDMEPFMGENFLLKNETAVSLYHNYAKDMPIIDYHCHLSPKEIYEN 50
|:.|||::|||.::|||.||..||::||||||||||||||||||
RBAM_012380__ 1 ------MKAFMGDDFLLNSKTAVKLYREYAENMPIIDYHCHLSPKEIYEN 44
BSNT_02087___ 51 STFQNITEAWLYGDHYKWRIMRANGIEETYITGDAPDEEKFMAWAKTVPM 100
.||..|||||||||||||||||||||||..|||:|.|||||.||||||||
RBAM_012380__ 45 KTFATITEAWLYGDHYKWRIMRANGIEERCITGNASDEEKFFAWAKTVPM 94
BSNT_02087___ 101 AIGNPLYNWTHLELQRFFGIYEILNEKSGPAIWKRTNELLKGEGFGARDL 150
|||||||:||||||||:||||::||||:..||||:|||||:|:|||||||
RBAM_012380__ 95 AIGNPLYSWTHLELQRWFGIYDVLNEKTAAAIWKKTNELLQGDGFGARDL 144
BSNT_02087___ 151 IVKSNVKVVCTTDDPVDSLEYHLLLREDKDFPVSVLPGFRPDKGLEINRE 200
|:||||||:||||||.|:|.||.||:| .||||.|||||||||||:|:..
RBAM_012380__ 145 ILKSNVKVICTTDDPADALTYHELLKE-SDFPVQVLPGFRPDKGLDISSP 193
BSNT_02087___ 201 GFPEWVQALEDAAAISITTYDEFLKALEKRVRFFHSAGGRVSDHAIDSMV 250
||.:||::||.|:.:::::|..:|.|||.||||||:|||||||||:|.||
RBAM_012380__ 194 GFADWVRSLESASGMAVSSYQSYLDALESRVRFFHNAGGRVSDHALDQMV 243
BSNT_02087___ 251 FAETTKEEAGRIFSDRLQGTEVSEEAEKKFKTYTLQFLCGLYAELDWAMQ 300
:||||:|||.|||:..|.|..||.|.||||||.|||:|||||||||||||
RBAM_012380__ 244 YAETTEEEAARIFAAGLSGEHVSFEDEKKFKTRTLQYLCGLYAELDWAMQ 293
BSNT_02087___ 301 FHINALRNTNTKMMKRLGPDTGYDSMNDEEIAKPLYKLLNSVEMKNQLPK 350
|||||||||||.....|||||||||:|||.|||||.:||:|.|.|.||||
RBAM_012380__ 294 FHINALRNTNTNKFSSLGPDTGYDSINDERIAKPLARLLDSAEKKRQLPK 343
BSNT_02087___ 351 TILYSLNPNDNYVIASMINSFQDGITPGKIQFGTAWWFNDTKDGMLDQMK 400
||||||||||||:|||||||||||.|||||||||||||||||||||.||:
RBAM_012380__ 344 TILYSLNPNDNYIIASMINSFQDGKTPGKIQFGTAWWFNDTKDGMLQQMR 393
BSNT_02087___ 401 ALSNVGLFSRFIGMLTDSRSFLSYTRHEYFRRIVCNLIGEWVENGEVPRD 450
||||:|||||||||||||||||||.|||||||:||.|||.|.|.||.|.|
RBAM_012380__ 394 ALSNMGLFSRFIGMLTDSRSFLSYPRHEYFRRLVCTLIGGWAEQGEAPYD 443
BSNT_02087___ 451 MELLGSIVQGICYDNAKHYFQFQEEKANV 479
|||||.||:||||.||:.||:|
RBAM_012380__ 444 MELLGKIVEGICYRNAEEYFRF------- 465
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