Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02084 and RBAM_012360

See DNA alignment / Visit BSNT_02084 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:47
# Commandline: needle
#    -asequence pep-align/BSNT_02084___yjlC.1.9828.seq
#    -bsequence pep-align/RBAM_012360___yjlC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02084___yjlC-RBAM_012360___yjlC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02084___yjlC-RBAM_012360___yjlC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02084___yjlC
# 2: RBAM_012360___yjlC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 140
# Identity:     130/140 (92.9%)
# Similarity:   136/140 (97.1%)
# Gaps:           2/140 ( 1.4%)
# Score: 643.0
# 
#
#=======================================

BSNT_02084___      1 MPETIDQTNASVSQSQQDLIDQLLKPEVQESLTVLVDQLPKLTELVNILT     50
                     ||||||||||||||.|:|||||||||||||||||||||||||||||||||
RBAM_012360__      1 MPETIDQTNASVSQGQRDLIDQLLKPEVQESLTVLVDQLPKLTELVNILT     50

BSNT_02084___     51 KSYDFAQSVATDEVLKSDTVGAITEILEPVKETAKEVAATAIEAKDRAEA    100
                     ||||||||||||||||||||||:|||||||||||||||||||||||||:|
RBAM_012360__     51 KSYDFAQSVATDEVLKSDTVGALTEILEPVKETAKEVAATAIEAKDRADA    100

BSNT_02084___    101 SNETIGLFGLLRMLKDPQAQKLFRFANSYLEVMNERENQK    140
                     |||||||||||||||||||||||||||||||:|||::.  
RBAM_012360__    101 SNETIGLFGLLRMLKDPQAQKLFRFANSYLEIMNEKQK--    138


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