Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02079 and RBAM_012340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:47
# Commandline: needle
# -asequence pep-align/BSNT_02079___yjlA.1.9828.seq
# -bsequence pep-align/RBAM_012340___yjlA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02079___yjlA-RBAM_012340___yjlA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02079___yjlA-RBAM_012340___yjlA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02079___yjlA
# 2: RBAM_012340___yjlA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 327
# Identity: 256/327 (78.3%)
# Similarity: 289/327 (88.4%)
# Gaps: 3/327 ( 0.9%)
# Score: 1311.5
#
#
#=======================================
BSNT_02079___ 1 MKAIVIGILASLFFAVTFILNRAMELSGGSWLWSSSLRFIFMVPFLCLIV 50
|||||||||||||||||||||||||||||||:|||||||:||||||.|||
RBAM_012340__ 1 MKAIVIGILASLFFAVTFILNRAMELSGGSWMWSSSLRFLFMVPFLFLIV 50
BSNT_02079___ 51 IMRGTFTPLLLEMRKKPFYWIKWSFVGFVLFYAPITFAAAYGPGWLIAGT 100
.::|.:.||..|:|||||:|:||||.||||||||||||||||||||||||
RBAM_012340__ 51 YVKGKWGPLWHEIRKKPFFWLKWSFTGFVLFYAPITFAAAYGPGWLIAGT 100
BSNT_02079___ 101 WQITIVAGVLLSPLFYVKQDMPGGPQFVRQKIPLVSLGTSMIILIGAALI 150
|||||||||||||.||..::.|.||...||||||:||.||:||||||.||
RBAM_012340__ 101 WQITIVAGVLLSPFFYETKNSPAGPVSARQKIPLISLVTSVIILIGAGLI 150
BSNT_02079___ 151 QLQHAESLSGRMLLFSVLPVVIAAFAYPLGNRRMLEEYGGRLDTFQRVLG 200
|||||.|||||.:||||:||||||||||||||:|||:|||:|||||||||
RBAM_012340__ 151 QLQHAGSLSGRTILFSVVPVVIAAFAYPLGNRKMLEQYGGKLDTFQRVLG 200
BSNT_02079___ 201 MTLASLPFWLILAAYGWWSDGLPTASQTVQSFIVAVSSGIIATVLFFWAT 250
||||||||||::||:||..||||:..||.||||||:|||:|||||||.||
RBAM_012340__ 201 MTLASLPFWLLIAAFGWHRDGLPSMGQTFQSFIVALSSGVIATVLFFRAT 250
BSNT_02079___ 251 DMVRDNPQKLAAVEATQSGEVIFALLGEIVLLSGVFPSLLSFAGLFIIIA 300
||||:.|||||||||||||||:|||:||||.||..|||||||||||||||
RBAM_012340__ 251 DMVRNEPQKLAAVEATQSGEVLFALIGEIVFLSAAFPSLLSFAGLFIIIA 300
BSNT_02079___ 301 GMMLHTFASQ--PRKPKKKAQSNLTA- 324
||::|||||: .:|..::..:|||.
RBAM_012340__ 301 GMVMHTFASRQTDQKTAEQTSANLTGS 327
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