Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02079 and RBAM_012340

See DNA alignment / Visit BSNT_02079 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:47
# Commandline: needle
#    -asequence pep-align/BSNT_02079___yjlA.1.9828.seq
#    -bsequence pep-align/RBAM_012340___yjlA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02079___yjlA-RBAM_012340___yjlA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02079___yjlA-RBAM_012340___yjlA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02079___yjlA
# 2: RBAM_012340___yjlA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 327
# Identity:     256/327 (78.3%)
# Similarity:   289/327 (88.4%)
# Gaps:           3/327 ( 0.9%)
# Score: 1311.5
# 
#
#=======================================

BSNT_02079___      1 MKAIVIGILASLFFAVTFILNRAMELSGGSWLWSSSLRFIFMVPFLCLIV     50
                     |||||||||||||||||||||||||||||||:|||||||:||||||.|||
RBAM_012340__      1 MKAIVIGILASLFFAVTFILNRAMELSGGSWMWSSSLRFLFMVPFLFLIV     50

BSNT_02079___     51 IMRGTFTPLLLEMRKKPFYWIKWSFVGFVLFYAPITFAAAYGPGWLIAGT    100
                     .::|.:.||..|:|||||:|:||||.||||||||||||||||||||||||
RBAM_012340__     51 YVKGKWGPLWHEIRKKPFFWLKWSFTGFVLFYAPITFAAAYGPGWLIAGT    100

BSNT_02079___    101 WQITIVAGVLLSPLFYVKQDMPGGPQFVRQKIPLVSLGTSMIILIGAALI    150
                     |||||||||||||.||..::.|.||...||||||:||.||:||||||.||
RBAM_012340__    101 WQITIVAGVLLSPFFYETKNSPAGPVSARQKIPLISLVTSVIILIGAGLI    150

BSNT_02079___    151 QLQHAESLSGRMLLFSVLPVVIAAFAYPLGNRRMLEEYGGRLDTFQRVLG    200
                     |||||.|||||.:||||:||||||||||||||:|||:|||:|||||||||
RBAM_012340__    151 QLQHAGSLSGRTILFSVVPVVIAAFAYPLGNRKMLEQYGGKLDTFQRVLG    200

BSNT_02079___    201 MTLASLPFWLILAAYGWWSDGLPTASQTVQSFIVAVSSGIIATVLFFWAT    250
                     ||||||||||::||:||..||||:..||.||||||:|||:|||||||.||
RBAM_012340__    201 MTLASLPFWLLIAAFGWHRDGLPSMGQTFQSFIVALSSGVIATVLFFRAT    250

BSNT_02079___    251 DMVRDNPQKLAAVEATQSGEVIFALLGEIVLLSGVFPSLLSFAGLFIIIA    300
                     ||||:.|||||||||||||||:|||:||||.||..|||||||||||||||
RBAM_012340__    251 DMVRNEPQKLAAVEATQSGEVLFALIGEIVFLSAAFPSLLSFAGLFIIIA    300

BSNT_02079___    301 GMMLHTFASQ--PRKPKKKAQSNLTA-    324
                     ||::|||||:  .:|..::..:|||. 
RBAM_012340__    301 GMVMHTFASRQTDQKTAEQTSANLTGS    327


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