Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02071 and RBAM_012300

See DNA alignment / Visit BSNT_02071 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:47
# Commandline: needle
#    -asequence pep-align/BSNT_02071___yjiC.1.9828.seq
#    -bsequence pep-align/RBAM_012300___yjiC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02071___yjiC-RBAM_012300___yjiC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02071___yjiC-RBAM_012300___yjiC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02071___yjiC
# 2: RBAM_012300___yjiC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 395
# Identity:     239/395 (60.5%)
# Similarity:   310/395 (78.5%)
# Gaps:           3/395 ( 0.8%)
# Score: 1261.0
# 
#
#=======================================

BSNT_02071___      1 -MKKYHISMINIPAYGHVNPTLALVEKLCEKGHRVTYATTEEFAPAVQQA     49
                      |:|.||::||:.|:|||||||.:.|:|..:|::||:||||||..:|.:.
RBAM_012300__      1 MMRKTHIAIINVAAHGHVNPTLPVAEELVNRGYKVTFATTEEFEASVAKT     50

BSNT_02071___     50 GGEALLYHTSLNIDPKQIREMMEKNDAPLSLLKESLSILPQLEELYKDDQ     99
                     |...:||.||:..||:.|:|.:.||||.:..|:|::.:|||||||||||.
RBAM_012300__     51 GAIPVLYRTSIKADPETIKERVNKNDAFVMFLEEAVEVLPQLEELYKDDL    100

BSNT_02071___    100 PDLIIYDFVALAGKLFAEKLNVPVIKLCSSYAQNESFQLG-NEDMLKKIR    148
                     ||::::||:||||||||:...:|.:|.|.|||.||.|||| :|:.|:..:
RBAM_012300__    101 PDIVLFDFLALAGKLFADNGGIPAVKFCPSYAMNEYFQLGRDEETLEAAK    150

BSNT_02071___    149 EAEAEFKAYLEQEKLPAVSFEQLAVPEALNIVFMPKSFQIQHETFDDRFC    198
                     :|..|::..:|.|:|..::.|:..:||.|||||||::||.:.||||:|||
RBAM_012300__    151 QAIEEYQEQIENEQLKRMTMEEFFMPEKLNIVFMPRAFQPKQETFDERFC    200

BSNT_02071___    199 FVGPSLGERKEKESLLID-KDDRPLMLISLGTAFNTWPEFYKMCIKAFRD    247
                     |.|||||||....||.|| .|||||||||||||||.|||||:|||.||||
RBAM_012300__    201 FAGPSLGERTNTGSLEIDAADDRPLMLISLGTAFNAWPEFYQMCIDAFRD    250

BSNT_02071___    248 SSWQVIMSVGKTIDPESLEDIPANFTIRQSVPQLEVLEKADLFISHGGMN    297
                     |.|:||||||.||||||..|:|.:|.|||.||||:|||||.||:||||||
RBAM_012300__    251 SDWRVIMSVGTTIDPESFSDVPDHFIIRQHVPQLDVLEKAKLFVSHGGMN    300

BSNT_02071___    298 STMEAMNAGVPLVVIPQMYEQELTANRVDELGLGVYLPKEEVTVSSLQEA    347
                     ||||||||||||||:|||:|||:||.|||||||||:||.:||||:.||:.
RBAM_012300__    301 STMEAMNAGVPLVVVPQMHEQEVTAKRVDELGLGVHLPPKEVTVARLQKD    350

BSNT_02071___    348 VQAVSSDQELLSRVKNMQKDVKEAGGAERAAAEIEAFMKKSAVPQ    392
                     ||.|..|:.:|||||:||:.::|.||.::|...||.|:||:||..
RBAM_012300__    351 VQNVYGDKNILSRVKSMQQKIEETGGPKQAVCAIEEFLKKAAVEN    395


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