Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02071 and RBAM_012300
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:47
# Commandline: needle
# -asequence pep-align/BSNT_02071___yjiC.1.9828.seq
# -bsequence pep-align/RBAM_012300___yjiC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02071___yjiC-RBAM_012300___yjiC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02071___yjiC-RBAM_012300___yjiC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02071___yjiC
# 2: RBAM_012300___yjiC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 395
# Identity: 239/395 (60.5%)
# Similarity: 310/395 (78.5%)
# Gaps: 3/395 ( 0.8%)
# Score: 1261.0
#
#
#=======================================
BSNT_02071___ 1 -MKKYHISMINIPAYGHVNPTLALVEKLCEKGHRVTYATTEEFAPAVQQA 49
|:|.||::||:.|:|||||||.:.|:|..:|::||:||||||..:|.:.
RBAM_012300__ 1 MMRKTHIAIINVAAHGHVNPTLPVAEELVNRGYKVTFATTEEFEASVAKT 50
BSNT_02071___ 50 GGEALLYHTSLNIDPKQIREMMEKNDAPLSLLKESLSILPQLEELYKDDQ 99
|...:||.||:..||:.|:|.:.||||.:..|:|::.:|||||||||||.
RBAM_012300__ 51 GAIPVLYRTSIKADPETIKERVNKNDAFVMFLEEAVEVLPQLEELYKDDL 100
BSNT_02071___ 100 PDLIIYDFVALAGKLFAEKLNVPVIKLCSSYAQNESFQLG-NEDMLKKIR 148
||::::||:||||||||:...:|.:|.|.|||.||.|||| :|:.|:..:
RBAM_012300__ 101 PDIVLFDFLALAGKLFADNGGIPAVKFCPSYAMNEYFQLGRDEETLEAAK 150
BSNT_02071___ 149 EAEAEFKAYLEQEKLPAVSFEQLAVPEALNIVFMPKSFQIQHETFDDRFC 198
:|..|::..:|.|:|..::.|:..:||.|||||||::||.:.||||:|||
RBAM_012300__ 151 QAIEEYQEQIENEQLKRMTMEEFFMPEKLNIVFMPRAFQPKQETFDERFC 200
BSNT_02071___ 199 FVGPSLGERKEKESLLID-KDDRPLMLISLGTAFNTWPEFYKMCIKAFRD 247
|.|||||||....||.|| .|||||||||||||||.|||||:|||.||||
RBAM_012300__ 201 FAGPSLGERTNTGSLEIDAADDRPLMLISLGTAFNAWPEFYQMCIDAFRD 250
BSNT_02071___ 248 SSWQVIMSVGKTIDPESLEDIPANFTIRQSVPQLEVLEKADLFISHGGMN 297
|.|:||||||.||||||..|:|.:|.|||.||||:|||||.||:||||||
RBAM_012300__ 251 SDWRVIMSVGTTIDPESFSDVPDHFIIRQHVPQLDVLEKAKLFVSHGGMN 300
BSNT_02071___ 298 STMEAMNAGVPLVVIPQMYEQELTANRVDELGLGVYLPKEEVTVSSLQEA 347
||||||||||||||:|||:|||:||.|||||||||:||.:||||:.||:.
RBAM_012300__ 301 STMEAMNAGVPLVVVPQMHEQEVTAKRVDELGLGVHLPPKEVTVARLQKD 350
BSNT_02071___ 348 VQAVSSDQELLSRVKNMQKDVKEAGGAERAAAEIEAFMKKSAVPQ 392
||.|..|:.:|||||:||:.::|.||.::|...||.|:||:||..
RBAM_012300__ 351 VQNVYGDKNILSRVKSMQQKIEETGGPKQAVCAIEEFLKKAAVEN 395
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