Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02065 and RBAM_012280
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:46
# Commandline: needle
# -asequence pep-align/BSNT_02065___yjgD.1.9828.seq
# -bsequence pep-align/RBAM_012280___yjgD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02065___yjgD-RBAM_012280___yjgD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02065___yjgD-RBAM_012280___yjgD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02065___yjgD
# 2: RBAM_012280___yjgD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 186
# Identity: 132/186 (71.0%)
# Similarity: 154/186 (82.8%)
# Gaps: 6/186 ( 3.2%)
# Score: 672.0
#
#
#=======================================
BSNT_02065___ 1 MAKAIKRIQKIEVTEEDQRKRDLREIEDALVDHKEAILETLHMLGHMNER 50
|||||..|:|..|||||:||:||.|||.||:.:|:||||:||:|.|||||
RBAM_012280__ 1 MAKAISGIRKQTVTEEDKRKKDLEEIETALLRNKDAILESLHILQHMNER 50
BSNT_02065___ 51 GVLPLLRGLFGQGDKVLDILVKKADTEETANTLKNLLLLFGTLGMLDVKQ 100
|||.||||||||||||:|||||||:|.||||.|||||||.|.||||||||
RBAM_012280__ 51 GVLALLRGLFGQGDKVMDILVKKANTPETANMLKNLLLLSGVLGMLDVKQ 100
BSNT_02065___ 101 LEPLILKVNAGVASAVEQKNSEEKTGYFDIIRSLKDPEINKSITLLFSFL 150
|||.|:|:||||..|||:|:|..|||||||:|:||||||||::|||||||
RBAM_012280__ 101 LEPFIVKINAGVTKAVEEKDSGRKTGYFDIVRALKDPEINKAVTLLFSFL 150
BSNT_02065___ 151 KGMGQDTKELERTTQPPEHQKYHQEPREKRGMNKRD 186
||||.||.::||.|||||.||.||:|:...
RBAM_012280__ 151 KGMGADTDDMERNTQPPEDQKQHQKPQTNE------ 180
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