Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02062 and RBAM_012270

See DNA alignment / Visit BSNT_02062 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:46
# Commandline: needle
#    -asequence pep-align/BSNT_02062.1.9828.seq
#    -bsequence pep-align/RBAM_012270___yjgC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02062-RBAM_012270___yjgC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02062-RBAM_012270___yjgC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02062
# 2: RBAM_012270___yjgC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 996
# Identity:     435/996 (43.7%)
# Similarity:   467/996 (46.9%)
# Gaps:         506/996 (50.8%)
# Score: 2381.0
# 
#
#=======================================

BSNT_02062         1 -----------MPGKKKITINGVEMEASEEQTVLQLLNNSSIEVPQVCYH     39
                                |.|.||:|||||||||.:.||||||||||||:||.||||
RBAM_012270__      1 MYRGVQKGEKKMAGTKKVTINGVEMEAPDGQTVLQLLNNSSIDVPHVCYH     50

BSNT_02062        40 PSLGPIETCDTCIVSINGELKRSCSAELKDGDVIDTLSPDVKKAQVIGMD     89
                     ||||||||||||||::||||.|||||::||||||||||.||||||:||||
RBAM_012270__     51 PSLGPIETCDTCIVNVNGELVRSCSAQIKDGDVIDTLSSDVKKAQIIGMD    100

BSNT_02062        90 KILYNHELYCTVCDYNNGGCEIHNTVKEMKINHQSIPFDHKPYHKDESHP    139
                     .||:||||||||||||||.||:|||||||||||||||||.|||.||||:|
RBAM_012270__    101 NILHNHELYCTVCDYNNGSCEVHNTVKEMKINHQSIPFDQKPYPKDESNP    150

BSNT_02062       140 FYRYDPDQCILCGRCVEACQDVQVTETLTIDWERKRPRVIWDNDVPINES    189
                     ||||||||||||||||||||||||||||:|||||||||||||.|||||||
RBAM_012270__    151 FYRYDPDQCILCGRCVEACQDVQVTETLSIDWERKRPRVIWDQDVPINES    200

BSNT_02062       190 SCVSCGHCSTVCPCNAMMEKGMEGEAGYLTGINNETLRPMIEITKGVETG    239
                     |||||||||||||||||||||||||||||||||.|||||||:||||||||
RBAM_012270__    201 SCVSCGHCSTVCPCNAMMEKGMEGEAGYLTGINQETLRPMIDITKGVETG    250

BSNT_02062       240 YGSILAISDMESAMRDERIKKTKTVCTYCGVGCSFDVWTKGRDILKVEPQ    289
                     ||||||||||||||||||||||||||||||||||||:|||||||||||||
RBAM_012270__    251 YGSILAISDMESAMRDERIKKTKTVCTYCGVGCSFDIWTKGRDILKVEPQ    300

BSNT_02062       290 EEAPANGISTCVKGKFGWDFVNSEERLTKPLIREGDHFREAEWEEALLLI    339
                     .|||||||||||||||||||||||:|||||||||||.||||||:|||.||
RBAM_012270__    301 AEAPANGISTCVKGKFGWDFVNSEKRLTKPLIREGDSFREAEWDEALQLI    350

BSNT_02062       340 ASKFTELKEAFGPDSLAFITSSKCTNEESYLMQKLARGVIGTNNVDNCSR    389
                     |.|||::||.||||:|||||||||||||||:||||||.||||||||||||
RBAM_012270__    351 ADKFTDIKEHFGPDALAFITSSKCTNEESYVMQKLARAVIGTNNVDNCSR    400

BSNT_02062       390 YCQSPATAGLFRTVGYGGDSGSITDIAQADLVLIIGSNTSESHPVLSTRI    439
                     ||||||||||||||||||||||||||.:|:||||||||||||||||||||
RBAM_012270__    401 YCQSPATAGLFRTVGYGGDSGSITDIEKAELVLIIGSNTSESHPVLSTRI    450

BSNT_02062       440 KRAHKLRGQKVIVADIRKHEMAERSDLFVQPRAGSDIVWLNAIAKYLIEN    489
                     ||:|||.|||::|||:||||||||||:|.|||||||||||||::|||:::
RBAM_012270__    451 KRSHKLHGQKLVVADLRKHEMAERSDVFFQPRAGSDIVWLNAVSKYLLDH    500

BSNT_02062       490 G-------------------------------------------------    490
                     .                                                 
RBAM_012270__    501 DLADTSFLKERVNGLDEFVKSLEPYTMEYAEKHTGVDKDTLIKVARMIHE    550

BSNT_02062       490 --------------------------------------------------    490
                                                                       
RBAM_012270__    551 AGSVCALWAMGVTQHIGGSDTSTAISNMLLVTGNYGKPGAGSYPLRGHNN    600

BSNT_02062       490 --------------------------------------------------    490
                                                                       
RBAM_012270__    601 VQGASDFGSMPDSFPGYEKVTDEKARKKYEQGWGTDLPKEIGMTNHEMIE    650

BSNT_02062       490 --------------------------------------------------    490
                                                                       
RBAM_012270__    651 GIHSGKLKSMYLKGEEMGLVDSNINHVHAAFEKLDFFVVQDIFLSRTAEF    700

BSNT_02062       490 --------------------------------------------------    490
                                                                       
RBAM_012270__    701 ADVVLPASPSLEKEGTFTNTERRVQRLYEVFEPLGDSKPDWQIITDIANR    750

BSNT_02062       490 --------------------------------------------------    490
                                                                       
RBAM_012270__    751 LGADWHYEHPADIMEEAAMLSPLYAGVTYERLEGYNSLQWPVAADGTDSP    800

BSNT_02062       490 --------------------------------------------------    490
                                                                       
RBAM_012270__    801 LLFTDKFPFSDGKAILYPVQWTEPKEFDEEYDIHVNNGRLLEHFHEGNLT    850

BSNT_02062       490 --------------------------------------------------    490
                                                                       
RBAM_012270__    851 YRSKGISEKTPSVFLEVSPELAEERGLEDGTLVRLTSPYGNVKVKCVITD    900

BSNT_02062       490 --------------------------------------------------    490
                                                                       
RBAM_012270__    901 RVKGKQVYLPMNDSKDAAINLLTSSYADKDTDTPAYKETSAKMEILKKEG    950

BSNT_02062       490 ----------------------------------------------    490
                                                                   
RBAM_012270__    951 VNPLPKINFRYGNPQPQIGVRVDRKWARKDYVFPGDAVKRGKQQNG    996


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