Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02061 and RBAM_012260

See DNA alignment / Visit BSNT_02061 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:46
# Commandline: needle
#    -asequence pep-align/BSNT_02061___yjgB.1.9828.seq
#    -bsequence pep-align/RBAM_012260___yjgB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02061___yjgB-RBAM_012260___yjgB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02061___yjgB-RBAM_012260___yjgB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02061___yjgB
# 2: RBAM_012260___yjgB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 195
# Identity:     116/195 (59.5%)
# Similarity:   139/195 (71.3%)
# Gaps:          10/195 ( 5.1%)
# Score: 580.5
# 
#
#=======================================

BSNT_02061___      1 --MKKTMSAITAAAAVTSCFTGFGAASFSA--PAKAAAQTNTLSENTNQS     46
                       .|||::...:|..:|.|  .|||.:||.  |..|||.:.|    .||.
RBAM_012260__      1 MLKKKTLATGLSAVMLTGC--AFGAEAFSVTQPVHAAAASKT----ENQR     44

BSNT_02061___     47 AAELVKNLYNTAYKGEMPQQAQGLTINKSTKGDVHAAFGEPERPVGGDNR     96
                     |.|||.:||.:|:||||||..:||.||:||:.||:...||||:.....|.
RBAM_012260__     45 AQELVNSLYQSAFKGEMPQNVRGLKINQSTRQDVYDKIGEPEQKADSRNP     94

BSNT_02061___     97 FDLYHWNMGQPGYGFSYHKDMTISEIRYFGTGVERQLNLGGVTPEVLQKQ    146
                     ||||.||||.|||||||||:..|||||||||||||:||||.|||:||.||
RBAM_012260__     95 FDLYSWNMGNPGYGFSYHKNGKISEIRYFGTGVERRLNLGSVTPDVLSKQ    144

BSNT_02061___    147 LGPANRVLTVPFTDEIDYVYDTGHYELHFVIGTDQTADHVNLKAK    191
                     :|.|:::||||.|.|.||||.||.|||.||||:||.||||||||:
RBAM_012260__    145 IGSADKILTVPKTGETDYVYHTGQYELRFVIGSDQKADHVNLKAR    189


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