Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02061 and RBAM_012260
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:46
# Commandline: needle
# -asequence pep-align/BSNT_02061___yjgB.1.9828.seq
# -bsequence pep-align/RBAM_012260___yjgB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02061___yjgB-RBAM_012260___yjgB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02061___yjgB-RBAM_012260___yjgB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02061___yjgB
# 2: RBAM_012260___yjgB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 195
# Identity: 116/195 (59.5%)
# Similarity: 139/195 (71.3%)
# Gaps: 10/195 ( 5.1%)
# Score: 580.5
#
#
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BSNT_02061___ 1 --MKKTMSAITAAAAVTSCFTGFGAASFSA--PAKAAAQTNTLSENTNQS 46
.|||::...:|..:|.| .|||.:||. |..|||.:.| .||.
RBAM_012260__ 1 MLKKKTLATGLSAVMLTGC--AFGAEAFSVTQPVHAAAASKT----ENQR 44
BSNT_02061___ 47 AAELVKNLYNTAYKGEMPQQAQGLTINKSTKGDVHAAFGEPERPVGGDNR 96
|.|||.:||.:|:||||||..:||.||:||:.||:...||||:.....|.
RBAM_012260__ 45 AQELVNSLYQSAFKGEMPQNVRGLKINQSTRQDVYDKIGEPEQKADSRNP 94
BSNT_02061___ 97 FDLYHWNMGQPGYGFSYHKDMTISEIRYFGTGVERQLNLGGVTPEVLQKQ 146
||||.||||.|||||||||:..|||||||||||||:||||.|||:||.||
RBAM_012260__ 95 FDLYSWNMGNPGYGFSYHKNGKISEIRYFGTGVERRLNLGSVTPDVLSKQ 144
BSNT_02061___ 147 LGPANRVLTVPFTDEIDYVYDTGHYELHFVIGTDQTADHVNLKAK 191
:|.|:::||||.|.|.||||.||.|||.||||:||.||||||||:
RBAM_012260__ 145 IGSADKILTVPKTGETDYVYHTGQYELRFVIGSDQKADHVNLKAR 189
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