Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02032 and RBAM_012090

See DNA alignment / Visit BSNT_02032 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:44
# Commandline: needle
#    -asequence pep-align/BSNT_02032.1.9828.seq
#    -bsequence pep-align/RBAM_012090___yjcS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02032-RBAM_012090___yjcS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02032-RBAM_012090___yjcS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02032
# 2: RBAM_012090___yjcS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 100
# Identity:      87/100 (87.0%)
# Similarity:    89/100 (89.0%)
# Gaps:           7/100 ( 7.0%)
# Score: 467.0
# 
#
#=======================================

BSNT_02032         1 -------MHYITACLKIISDKDLNEIMKEFKKLEEETNKEEGCITFHAYP     43
                            |||||||||||||||||||||||||||||||||||||.|||||
RBAM_012090__      1 MGRGGFSMHYITACLKIISDKDLNEIMKEFKKLEEETNKEEGCIQFHAYP     50

BSNT_02032        44 LEPSERKIMLWEIWENEEAVKTHFRKKHTIDVQKQELTEVEWLMESNVND     93
                     |||||||||||||||||||||.||.||||.||||||||||||||:||||:
RBAM_012090__     51 LEPSERKIMLWEIWENEEAVKVHFTKKHTKDVQKQELTEVEWLMKSNVNE    100


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