Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01977 and RBAM_011900

See DNA alignment / Visit BSNT_01977 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:44
# Commandline: needle
#    -asequence pep-align/BSNT_01977___yjcF.1.9828.seq
#    -bsequence pep-align/RBAM_011900___yjcF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01977___yjcF-RBAM_011900___yjcF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01977___yjcF-RBAM_011900___yjcF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01977___yjcF
# 2: RBAM_011900___yjcF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 143
# Identity:     103/143 (72.0%)
# Similarity:   125/143 (87.4%)
# Gaps:           3/143 ( 2.1%)
# Score: 552.0
# 
#
#=======================================

BSNT_01977___      1 MKAVIAKNEEQLKDAFYVREEVFVKEQNVPAEEEIDELENESEHIVVYDG     50
                     |:::|||.|:||.|||:||:|||||||:||.|||||:.|:.|||||:|||
RBAM_011900__      1 MESIIAKTEKQLNDAFFVRKEVFVKEQHVPEEEEIDQFEDTSEHIVIYDG     50

BSNT_01977___     51 EKPVGAGRWRMKDGYGKLERICVLKSHRSAGVGGIIMKALEKAAADGGAS    100
                     .:||||||||:|||:||||||||:|||||.|||.|||:|||||||..||.
RBAM_011900__     51 GQPVGAGRWRLKDGHGKLERICVMKSHRSLGVGAIIMQALEKAAAAKGAD    100

BSNT_01977___    101 GFILNAQTQAVPFYKKHGYRVLSEKEYLDAGIPHLQMMKD---    140
                     .|||:|||||||||:|.||||.|.:|:||||||||:|:|:   
RBAM_011900__    101 SFILHAQTQAVPFYEKQGYRVTSGEEFLDAGIPHLEMIKEHKR    143


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