Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01976 and RBAM_011850

See DNA alignment / Visit BSNT_01976 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:44
# Commandline: needle
#    -asequence pep-align/BSNT_01976.1.9828.seq
#    -bsequence pep-align/RBAM_011850.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01976-RBAM_011850.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01976-RBAM_011850.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01976
# 2: RBAM_011850
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 84
# Identity:      48/84 (57.1%)
# Similarity:    62/84 (73.8%)
# Gaps:           0/84 ( 0.0%)
# Score: 240.0
# 
#
#=======================================

BSNT_01976         1 MIYAGQIQNQQYAQYANRTIGHKQDYAGTEKISYVPFQRVYKELEKQQEN     50
                     |||||:||||||:|||||..|:|.|||...|.:.:...|||:|:|::|||
RBAM_011850        1 MIYAGRIQNQQYSQYANRAAGYKSDYASITKAAALANDRVYREVERRQEN     50

BSNT_01976        51 QTAAERKVNEMKRKRSLYKRLREKGMGTYINRYV     84
                     ..|||:||:|.||||||.:..:..|.|..||:||
RBAM_011850       51 TAAAEKKVHEEKRKRSLSRLPQIMGKGRLINQYV     84


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