Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01974 and RBAM_011830

See DNA alignment / Visit BSNT_01974 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:43
# Commandline: needle
#    -asequence pep-align/BSNT_01974.1.9828.seq
#    -bsequence pep-align/RBAM_011830___yjcC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01974-RBAM_011830___yjcC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01974-RBAM_011830___yjcC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01974
# 2: RBAM_011830___yjcC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 112
# Identity:      74/112 (66.1%)
# Similarity:    81/112 (72.3%)
# Gaps:          28/112 (25.0%)
# Score: 380.0
# 
#
#=======================================

BSNT_01974         1 ----------------------------MDNQFFKNIEKKTGVKMQDVMN     22
                                                 |||||||||||||||.|:||||
RBAM_011830__      1 MEFFPCLTGTCSALYSYNIVLLHKRRHNMDNQFFKNIEKKTGVSMKDVMN     50

BSNT_01974        23 LAGSLQNANFKDENTVRSVINRVAQLANRRVPKELEDKIVESITSGKEKL     72
                     |||||||||||||||||.||.:|:||||:|||||||||||:|||||||||
RBAM_011830__     51 LAGSLQNANFKDENTVRGVIQKVSQLANKRVPKELEDKIVQSITSGKEKL    100

BSNT_01974        73 DFGTISKMMDNK     84
                     ||||||||::||
RBAM_011830__    101 DFGTISKMLNNK    112


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