Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01974 and RBAM_011830
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:43
# Commandline: needle
# -asequence dna-align/BSNT_01974.1.9828.seq
# -bsequence dna-align/RBAM_011830___yjcC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01974-RBAM_011830___yjcC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01974-RBAM_011830___yjcC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01974
# 2: RBAM_011830___yjcC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 343
# Identity: 202/343 (58.9%)
# Similarity: 202/343 (58.9%)
# Gaps: 92/343 (26.8%)
# Score: 791.0
#
#
#=======================================
BSNT_01974 0 -------------------------------------------------- 0
RBAM_011830__ 1 TTGGAATTTTTTCCTTGTCTTACGGGCACATGTTCCGCTCTTTATTCATA 50
BSNT_01974 1 ----------------------------------ATGGATAATCAATTTT 16
||||||||||||||||
RBAM_011830__ 51 CAATATCGTATTACTCCACAAAAGGAGGCACAACATGGATAATCAATTTT 100
BSNT_01974 17 TTAAGAACATCGAAAAGAAAACAGGTGTGAAGATGCAGGATGTAATGAAT 66
|.||.||.||.||.|||||||||||.||.|..|||.|||||||.|||||.
RBAM_011830__ 101 TCAAAAATATTGAGAAGAAAACAGGCGTCAGCATGAAGGATGTCATGAAC 150
BSNT_01974 67 CTTGCCGGATCACTCCAAAACGCTAATTTTAAAGATGAAAATACAGTCCG 116
|||||.||.|||.|.|||||.||.|||||.|||||||||||.||.||..|
RBAM_011830__ 151 CTTGCAGGGTCATTGCAAAATGCCAATTTCAAAGATGAAAACACGGTGAG 200
BSNT_01974 117 CAGTGTGATTAACCGCGTAG----CGCAGCTGGCAAACAGACGCGTGCCA 162
..|.||.|||.| |.|| |.||||||||.||||..||.||.||.
RBAM_011830__ 201 AGGCGTCATTCA----GAAGGTGTCCCAGCTGGCTAACAAGCGTGTTCCG 246
BSNT_01974 163 AAAGAATTAGAAGATAAAATTGTGGAATCTATTACAAGCGGAAAAGAAAA 212
||||||||.|||||.|||||.||..||||||||||||||||.|||||.||
RBAM_011830__ 247 AAAGAATTGGAAGACAAAATCGTTCAATCTATTACAAGCGGTAAAGAGAA 296
BSNT_01974 213 GCTTGATTTTGGCACGATTTCTAAAATGATGGATAATAAATAA 255
.||||||||||||||.||||||||||||.||.|.||||||||.
RBAM_011830__ 297 ACTTGATTTTGGCACCATTTCTAAAATGCTGAACAATAAATAG 339
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