Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01969 and RBAM_011800

See DNA alignment / Visit BSNT_01969 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:43
# Commandline: needle
#    -asequence pep-align/BSNT_01969___yjcA.1.9828.seq
#    -bsequence pep-align/RBAM_011800___yjcA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01969___yjcA-RBAM_011800___yjcA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01969___yjcA-RBAM_011800___yjcA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01969___yjcA
# 2: RBAM_011800___yjcA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 124
# Identity:      91/124 (73.4%)
# Similarity:    98/124 (79.0%)
# Gaps:           6/124 ( 4.8%)
# Score: 464.0
# 
#
#=======================================

BSNT_01969___      1 ------MVINGLTIVLLSLAVFRLARLLVFDTIMAPLRSLFHEEKEEKDA     44
                           :|||.|:.:|||.||||||||.|||||||||||||||||.|...
RBAM_011800__      1 MKRSEQVVINWLSFILLSFAVFRLARLFVFDTIMAPLRSLFHEEKTETAP     50

BSNT_01969___     45 DGNIETYIVIKGTGVRAFIGELLSCYWCTGVWCAGFLILCQALIPQAAQW     94
                     ||..||||||||.|:|||||||||||||||||||.|||..|.:||:.|||
RBAM_011800__     51 DGTTETYIVIKGKGIRAFIGELLSCYWCTGVWCAAFLIAAQIVIPETAQW    100

BSNT_01969___     95 LILLLAIAGLAGIIETLVSKWLQE    118
                     |||||||||.|||||..||:.|||
RBAM_011800__    101 LILLLAIAGAAGIIEAAVSRLLQE    124


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