Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01967 and RBAM_011790

See DNA alignment / Visit BSNT_01967 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:43
# Commandline: needle
#    -asequence pep-align/BSNT_01967___cotV.1.9828.seq
#    -bsequence pep-align/RBAM_011790___cotV.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01967___cotV-RBAM_011790___cotV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01967___cotV-RBAM_011790___cotV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01967___cotV
# 2: RBAM_011790___cotV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 128
# Identity:      57/128 (44.5%)
# Similarity:    85/128 (66.4%)
# Gaps:           0/128 ( 0.0%)
# Score: 265.0
# 
#
#=======================================

BSNT_01967___      1 MSVQENVDTLYSKMFKELAEEHDNYIEIIDSEKITIHKSDTTFALSLQSA     50
                     ||.:|.|:||..::|::|:.|.:..||:||.|.:|:..:..|.|||:|::
RBAM_011790__      1 MSFEEKVETLQPQIFEQLSNEFEQKIEVIDCENVTVDTTHITAALSIQAS     50

BSNT_01967___     51 VSALITVTTQLLISDSDIADIVASDLIARSTAHSRKKVKIKIINCYNITI    100
                     |:|.|.:.|||:|:|.|.||.:|::|:.......:|:..|::||..||.|
RBAM_011790__     51 VTAAIILATQLVIADEDTADQMATELLILEDCQIKKRTLIQVINSRNIKI    100

BSNT_01967___    101 TLSATDIMASVQLLTQTLIALITEADIL    128
                     ||:|.||||.||.|.|.|..|..|.|||
RBAM_011790__    101 TLTADDIMAFVQTLFQLLNILFAELDIL    128


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