Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01967 and RBAM_011790
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:43
# Commandline: needle
# -asequence dna-align/BSNT_01967___cotV.1.9828.seq
# -bsequence dna-align/RBAM_011790___cotV.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01967___cotV-RBAM_011790___cotV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01967___cotV-RBAM_011790___cotV.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01967___cotV
# 2: RBAM_011790___cotV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 451
# Identity: 235/451 (52.1%)
# Similarity: 235/451 (52.1%)
# Gaps: 128/451 (28.4%)
# Score: 512.0
#
#
#=======================================
BSNT_01967___ 1 ATGTCTGTCCAAGAAAATGTTGACACACT-CTACTCAAAAATGTTTAAAG 49
|||||..|..|||||||.||.||.||||| |.|| |..||||.||..||.
RBAM_011790__ 1 ATGTCGTTTGAAGAAAAAGTCGAAACACTGCAAC-CGCAAATATTCGAAC 49
BSNT_01967___ 50 AACTGGCTGAAGAACATGATAATTATATAGAAATTATTGATTCTGAAAAG 99
||.|..|..|.|||...||..|..|.||.|||.|.|||||||..|||||.
RBAM_011790__ 50 AATTATCCAACGAATTCGAGCAGAAGATCGAAGTGATTGATTGCGAAAAT 99
BSNT_01967___ 100 ATTAC----GATTCATAAATCAGACACCACAT-------TTGCACTTTCA 138
.|.|| ||| |||.||||| .|||.|||||.
RBAM_011790__ 100 GTCACAGTAGAT-----------ACAACACATATAACGGCTGCTCTTTCT 138
BSNT_01967___ 139 TTGCAATCAGCAGTTTCAGCTTTAATCACTG------TTA------CAAC 176
.|.|| |||||.|.|.|||| ||| |.||
RBAM_011790__ 139 ATACA------------AGCTTCAGTTACTGCGGCGATTATCCTCGCGAC 176
BSNT_01967___ 177 CCAGCTTCTTATCAGCGATAGC-GATATAGCAGACATTGTTGCGAG-TGA 224
.||||| .|.|||.|| ||| |.||||| .|| .||
RBAM_011790__ 177 ACAGCT-------CGTGATCGCAGAT---GAAGACA-------CAGCCGA 209
BSNT_01967___ 225 TCTGATAGCA--CGCTCTACAGCAC-------ATAGCCGAAAGAAAGTAA 265
||..||.||| ||..||.|.|..| ||.||| ||.|||
RBAM_011790__ 210 TCAAATGGCAACCGAACTGCTGATCCTCGAGGATTGCC------AAATAA 253
BSNT_01967___ 266 AAA---------TCA---AAATTATAAACTGCTATAATATCACAATCACT 303
||| ||| ||.|.||.|||.||...|||||.|.||||||.
RBAM_011790__ 254 AAAAGCGAACCCTCATTCAAGTCATTAACAGCCGCAATATTAAAATCACA 303
BSNT_01967___ 304 TTATCAGCTACAGAC---ATCATGGCATCCG------------TTCAGCT 338
.|..||| ||||| ||||||||.|..| |||||||
RBAM_011790__ 304 CTGACAG---CAGACGATATCATGGCCTTTGTACAAACTTTGTTTCAGCT 350
BSNT_01967___ 339 CTTAACCCAAACAT-TAATCGCTCTTATAACAGAAGCT-GACATTCTGTA 386
.|||| || || |||.|..|.||| || |||||.||.||
RBAM_011790__ 351 ATTAA-------ATATA------CTTTTTGCTGAA-CTAGACATCCTTTA 386
BSNT_01967___ 387 G 387
.
RBAM_011790__ 387 A 387
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