Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01966 and RBAM_011780

See DNA alignment / Visit BSNT_01966 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:43
# Commandline: needle
#    -asequence pep-align/BSNT_01966.1.9828.seq
#    -bsequence pep-align/RBAM_011780___cotW.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01966-RBAM_011780___cotW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01966-RBAM_011780___cotW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01966
# 2: RBAM_011780___cotW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 110
# Identity:      40/110 (36.4%)
# Similarity:    69/110 (62.7%)
# Gaps:          11/110 (10.0%)
# Score: 170.0
# 
#
#=======================================

BSNT_01966         1 MSEEKDALQKNKEELEAN---IDPLTKLLVSDVLNKNNVTEDKKRNLSEA     47
                     |::.    :|.|||| ||   :|||.|:|||:|..|:.||:||.|.:.:.
RBAM_011780__      1 MADN----EKFKEEL-ANLPEVDPLLKVLVSNVFKKHGVTKDKMREIPDE     45

BSNT_01966        48 QKQAIITMVNDLQKQANEFVERVNKKKADAEKAEQEAAPQKRRRTTLRDR     97
                     :|:.:|.:|.|:|.::..|:|...:||  .:||:::...|:.||..|.::
RBAM_011780__     46 EKEMLIALVKDMQAKSEAFLESQKQKK--EQKAQEQQTKQQTRREQLIEQ     93

BSNT_01966        98 VRQRKNDNI-    106
                     :|||:.:.. 
RBAM_011780__     94 LRQRRQNPGQ    103


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