Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01959 and RBAM_011740
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:43
# Commandline: needle
# -asequence pep-align/BSNT_01959___yjbX.1.9828.seq
# -bsequence pep-align/RBAM_011740___yjbX.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01959___yjbX-RBAM_011740___yjbX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01959___yjbX-RBAM_011740___yjbX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01959___yjbX
# 2: RBAM_011740___yjbX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 228
# Identity: 135/228 (59.2%)
# Similarity: 159/228 (69.7%)
# Gaps: 29/228 (12.7%)
# Score: 577.5
#
#
#=======================================
BSNT_01959___ 1 MSNKKRNADKKPLMYIVQPDYAETTRSSMQEIVI-KRKADKPAPPKAEEK 49
||.:.|||:|||||||||.||:: |:||||:|:| |||| |.|| ||:
RBAM_011740__ 1 MSKQNRNAEKKPLMYIVQADYSD-TQSSMQDILIKKRKA--PQPP--EEE 45
BSNT_01959___ 50 PAYHEKEQEEAVAQDVLQEDQKPAAEPVSQQIQEVREPENIKSQEEQKQE 99
| .|.|.:||... |.:...|.|| |.:.||.....||..||
RBAM_011740__ 46 P-MHGKREEECQT----QPEGAVAVEP------EKQVPEQHSRAEEAVQE 84
BSNT_01959___ 100 --PQAVEETVEHEPPKAEKKEEPALEARKPEKEPEAVHSADKAEEKAPPA 147
.||.::|.: |.|.|||..| .||||||||:| ..|||.||
RBAM_011740__ 85 VPAQAEQDTAK---PDAAKKEPDA-----AEKEPEAVHNA-APEEKVPP- 124
BSNT_01959___ 148 RKVKKPMSKMTIHEKIDFLTKLPHNMPRALCLIEANGRTYRGVIVGRRND 197
::||||||:|:|.|||||||||||||||.||||||||:|||||||||:|:
RBAM_011740__ 125 KRVKKPMSRMSILEKIDFLTKLPHNMPRTLCLIEANGKTYRGVIVGRKNN 174
BSNT_01959___ 198 SVLLRTTGNGAPTELAIDDITSLHPLGF 225
::.||||.||||.|||||||||||||||
RBAM_011740__ 175 AIFLRTTSNGAPAELAIDDITSLHPLGF 202
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