Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01959 and RBAM_011740
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:43
# Commandline: needle
# -asequence dna-align/BSNT_01959___yjbX.1.9828.seq
# -bsequence dna-align/RBAM_011740___yjbX.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01959___yjbX-RBAM_011740___yjbX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01959___yjbX-RBAM_011740___yjbX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01959___yjbX
# 2: RBAM_011740___yjbX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 724
# Identity: 455/724 (62.8%)
# Similarity: 455/724 (62.8%)
# Gaps: 161/724 (22.2%)
# Score: 1477.5
#
#
#=======================================
BSNT_01959___ 1 ATGTCTAATAAGAAAAGAAACGCGGATAAAAAACCGCTCATGTATATTGT 50
|||||.||..|.||.|||||||||||.|||||||||||||||||||||||
RBAM_011740__ 1 ATGTCAAAACAAAACAGAAACGCGGAAAAAAAACCGCTCATGTATATTGT 50
BSNT_01959___ 51 TCAGCCGGATTATGCAGAAACTACAAGGTCATCCATGCAGGAGATTGTCA 100
||||.||||||||.||||.|| .||| |||||.||||||||.||..|.|
RBAM_011740__ 51 TCAGGCGGATTATTCAGACAC-GCAA--TCATCAATGCAGGACATATTAA 97
BSNT_01959___ 101 TCAAAAGAAAGGCCGACAAACCCGCTCCGCCAAAAG-CTGAGGAAAAGCC 149
|||||| ||||| |||.|..|||.||| | |.||.|||.||||
RBAM_011740__ 98 TCAAAA-AAAGG-----AAAGCGCCTCAGCC----GCCGGAAGAAGAGCC 137
BSNT_01959___ 150 G--GCTTACCATGAGAAGGAGCAGGAGGAAGCTGTGGCACAGGATGTCCT 197
| | |||| ||| |||.|||||| ||.||||
RBAM_011740__ 138 GATG-----CATG-GAA--AGCGGGAGGA-----------AGAATGT--- 165
BSNT_01959___ 198 GCAAGAAGACCAAA---AGCCTGCAGCCGAACCAGTG--AGTCAGCAAAT 242
|||| ||||||.| |.|.||||| .|||
RBAM_011740__ 166 ----------CAAACTCAGCCTGAA---GGAGCAGTGGCTGTC------- 195
BSNT_01959___ 243 ACAAGAGGTGAGAGAGCCAGAGAACATAAAAAGCCAGGA--GGAACAGAA 290
||.|||| ||||||.||.| .||||||
RBAM_011740__ 196 -------------GAACCAG--------AAAAGCAAGTACCTGAACAG-- 222
BSNT_01959___ 291 ACAAGAGCCGCAGGCCGTAGAAGAAACCGTTGAACACGAGCC--CCCAA- 337
.|.||||| ||.|||||||.|||||.||.|.|..|| |.|||
RBAM_011740__ 223 --CACAGCCG-----CGCAGAAGAAGCCGTTCAAGAAGTTCCGGCGCAAG 265
BSNT_01959___ 338 --AAGCAGAA----------------------AAAAAGGAAGAGCCTGCA 363
.|||||.| |||| |||||||
RBAM_011740__ 266 CGGAGCAGGACACTGCCAAGCCTGACGCCGCTAAAA---AAGAGCC---- 308
BSNT_01959___ 364 CTTGAGGCCCGGAAGCCTGAGAAAGAACCGGAAGCTGTCCATAGTGCTGA 413
|||.||| .||||.|||||.||.||||||||.||.|.|||
RBAM_011740__ 309 --TGATGCC------GCTGAAAAAGAGCCTGAAGCTGTTCACAATGC--- 347
BSNT_01959___ 414 TAAAGCG-----GAGGAAAAAGCACCGCCGGCACGAAAA----GTGAAAA 454
|| |||||.||.|..||||| ||| |||||||
RBAM_011740__ 348 -----CGCCCCAGAGGAGAAGGTTCCGCC-------AAAGCGCGTGAAAA 385
BSNT_01959___ 455 AACCGATGAGCAAGATGACGATCCACGAAAAAATTGATTTTTTAACAAAG 504
|.||||||||||..|||.|.||.|..||||||||||||||.|||||.|||
RBAM_011740__ 386 AGCCGATGAGCAGAATGTCCATTCTTGAAAAAATTGATTTCTTAACGAAG 435
BSNT_01959___ 505 CTGCCTCATAACATGCCGAGAGCGCTTTGTTTGATTGAAGCCAATGGAAG 554
|||||.|||||.||||||.|..|.||||||.||||.||||||||.||.|.
RBAM_011740__ 436 CTGCCGCATAATATGCCGCGGACCCTTTGTCTGATAGAAGCCAACGGGAA 485
BSNT_01959___ 555 AACGTACAGGGGCGTGATTGTCGGAAGAAGAAATGATTCCGTCCTGCTTC 604
|||.|||||.||||||||.|||||.||||.||||.||.|..||.|.||.|
RBAM_011740__ 486 AACCTACAGAGGCGTGATCGTCGGCAGAAAAAATAATGCGATCTTCCTGC 535
BSNT_01959___ 605 GAACAACCGGAAACGGAGCCCCAACCGAACTGGCAATCGATGATATTACC 654
|.||.||..|.||||||||.||..|.|||||.||.||.||.|||||.|||
RBAM_011740__ 536 GGACGACAAGCAACGGAGCGCCGGCAGAACTCGCCATAGACGATATCACC 585
BSNT_01959___ 655 TCTTTGCACCCGCTCGGTTTTTAA 678
||..||||.|||||.||.||||||
RBAM_011740__ 586 TCGCTGCATCCGCTTGGATTTTAA 609
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