Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01956 and RBAM_011720

See DNA alignment / Visit BSNT_01956 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:42
# Commandline: needle
#    -asequence pep-align/BSNT_01956___yjbV.1.9828.seq
#    -bsequence pep-align/RBAM_011720___yjbV.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01956___yjbV-RBAM_011720___yjbV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01956___yjbV-RBAM_011720___yjbV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01956___yjbV
# 2: RBAM_011720___yjbV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity:     216/271 (79.7%)
# Similarity:   237/271 (87.5%)
# Gaps:           1/271 ( 0.4%)
# Score: 1113.0
# 
#
#=======================================

BSNT_01956___      1 MSIYKALTIAGSDSGGGAGIQADIKTFQELDVFGMSAITAVTAQNTLGVH     50
                     |||.|||||||||||||||||||:||||||.|||||||||||||||||||
RBAM_011720__      1 MSICKALTIAGSDSGGGAGIQADLKTFQELGVFGMSAITAVTAQNTLGVH     50

BSNT_01956___     51 GVHPLTVEALRQQIDAVAEDLRPDAVKTGMLWNADMIEEVARKIDEYGFN    100
                     |::|||.|||..||||||||||||||||||||:|:||.|:|.|.|:||.:
RBAM_011720__     51 GIYPLTREALGNQIDAVAEDLRPDAVKTGMLWSAEMIAEIAEKTDQYGLD    100

BSNT_01956___    101 RVIVDPVMIAKGGASLLRDESVATLKELLIPRSYAITPNVPEAETLTGMT    150
                     .:|.||||||||||||||:||.|.|||||||||||:||||||||.||||.
RBAM_011720__    101 HLITDPVMIAKGGASLLREESQAALKELLIPRSYAVTPNVPEAEVLTGME    150

BSNT_01956___    151 ISSLDDRKKAAEQLVKMGAQHVIIKGGHQPEDNHITDLLFDGSMFMQITH    200
                     |.:.:|||||||:|.|:||:|||||||||||...|.|||||||.|.||:|
RBAM_011720__    151 IRTFEDRKKAAERLCKLGAKHVIIKGGHQPEQGRIVDLLFDGSSFTQISH    200

BSNT_01956___    201 PYINTKHTHGTGCTFAAALTAQTAKGDSIHQAFEVAANFVREAVENTLGI    250
                     .||:|||||||||||||||||:||||.:|..|||.|.||||||||:||||
RBAM_011720__    201 AYIDTKHTHGTGCTFAAALTAETAKGKNIQTAFETAVNFVREAVEHTLGI    250

BSNT_01956___    251 GSGHGPTNHFAFKRNSLNTSR    271
                     |.|||||||||||||||.|. 
RBAM_011720__    251 GEGHGPTNHFAFKRNSLQTR-    270


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