Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01952 and RBAM_011700

See DNA alignment / Visit BSNT_01952 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:42
# Commandline: needle
#    -asequence pep-align/BSNT_01952___thiG.1.9828.seq
#    -bsequence pep-align/RBAM_011700___thiG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01952___thiG-RBAM_011700___thiG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01952___thiG-RBAM_011700___thiG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01952___thiG
# 2: RBAM_011700___thiG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 254
# Identity:     242/254 (95.3%)
# Similarity:   249/254 (98.0%)
# Gaps:           0/254 ( 0.0%)
# Score: 1203.0
# 
#
#=======================================

BSNT_01952___      1 MLTIGGKPFQSRLLLGTGKYPSFDIQKEAVAVSESDILTFAVRRMNIFDA     50
                     |||||||.|||||||||||||||:||||||||||||||||||||||||:.
RBAM_011700__      1 MLTIGGKQFQSRLLLGTGKYPSFEIQKEAVAVSESDILTFAVRRMNIFEE     50

BSNT_01952___     51 SQPNFLEQLDLSKYTLLPNTAGASTAEEAVRIARLAKASGLCDMIKVEVI    100
                     |||||||||||||||||||||||:||||||||||||||||||||||||||
RBAM_011700__     51 SQPNFLEQLDLSKYTLLPNTAGAATAEEAVRIARLAKASGLCDMIKVEVI    100

BSNT_01952___    101 GCSRSLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHAIM    150
                     |||||||||||||||||||||||||||||||||||||||:||||||||||
RBAM_011700__    101 GCSRSLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLARRLEELGVHAIM    150

BSNT_01952___    151 PGASPIGSGQGILNPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELGAD    200
                     ||||||||||||||||||||||||||||||||||:||.||||||||||||
RBAM_011700__    151 PGASPIGSGQGILNPLNLSFIIEQAKVPVIVDAGVGSSKDAAYAMELGAD    200

BSNT_01952___    201 GVLLNTAVSGADDPVKMARAMKLAVEAGRLSYEAGRIPLKQYGTASSPVE    250
                     ||||||||||||||||||||||||||||||||||||||:|.|||||||.:
RBAM_011700__    201 GVLLNTAVSGADDPVKMARAMKLAVEAGRLSYEAGRIPVKDYGTASSPRD    250

BSNT_01952___    251 GLPV    254
                     ||||
RBAM_011700__    251 GLPV    254


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