Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01952 and RBAM_011700
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:42
# Commandline: needle
# -asequence dna-align/BSNT_01952___thiG.1.9828.seq
# -bsequence dna-align/RBAM_011700___thiG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01952___thiG-RBAM_011700___thiG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01952___thiG-RBAM_011700___thiG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01952___thiG
# 2: RBAM_011700___thiG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 767
# Identity: 618/767 (80.6%)
# Similarity: 618/767 (80.6%)
# Gaps: 4/767 ( 0.5%)
# Score: 2470.0
#
#
#=======================================
BSNT_01952___ 1 ATGTTAACAATTGGCGGAAAACCATTTCAATCAAGATTGCTGCTGGGCAC 50
|||||||||||.||||||||||..|||||.||||||||||||.|.||.||
RBAM_011700__ 1 ATGTTAACAATAGGCGGAAAACAGTTTCAGTCAAGATTGCTGTTAGGAAC 50
BSNT_01952___ 51 GGGGAAATACCCATCGTTTGACATTCAAAAGGAAGCAGTAGCTGTTTCCG 100
|||.|||||.||....|||||.|||||.||.||.||.||.|||||.||.|
RBAM_011700__ 51 GGGAAAATATCCGAGTTTTGAGATTCAGAAAGAGGCGGTGGCTGTCTCGG 100
BSNT_01952___ 101 AGTCTGATATTTTAACCTTTGCTGTGCGGAGAATGAACATCTTTGATGCA 150
|.||.|||||||||||||||||.||..||.|.||||||||||||||.|..
RBAM_011700__ 101 AATCAGATATTTTAACCTTTGCGGTAAGGCGGATGAACATCTTTGAAGAG 150
BSNT_01952___ 151 TCTCAGCCGAATTTTCTGGAACAGCTTGATTTATCCAAATATACGCTTTT 200
||||||||.||.|||||.||||||||||||||.||.|||||.||||||.|
RBAM_011700__ 151 TCTCAGCCTAACTTTCTTGAACAGCTTGATTTGTCTAAATACACGCTTCT 200
BSNT_01952___ 201 GCCGAATACAGCGGGCGCCAGC-ACTGCTGAAGAAGCGGTTCGGATTGCA 249
|||||||||.||.|||||| || ||.||||||||.|||||..|.||.|||
RBAM_011700__ 201 GCCGAATACGGCCGGCGCC-GCAACGGCTGAAGAGGCGGTCAGAATCGCA 249
BSNT_01952___ 250 AGGCTGGCAAAAGCGTCAGGCCTTTGTGACATGATTAAAGTTGAAGTCAT 299
|||||.||.|||||.|||||.||||||||||||||.|||||.||||||||
RBAM_011700__ 250 AGGCTTGCCAAAGCTTCAGGGCTTTGTGACATGATAAAAGTAGAAGTCAT 299
BSNT_01952___ 300 CGGATGCAGCCGTTC-CTTGCTGCCTGACCCTGTTGAGACATTAAAAGCG 348
||||||||||||.|| ||| .|||||||.||.|||||.||..|.|||||.
RBAM_011700__ 300 CGGATGCAGCCGGTCACTT-TTGCCTGATCCGGTTGAAACGCTGAAAGCA 348
BSNT_01952___ 349 TCTGAACAGCTTCTTGAAGAAGGCTTTATTGTGCTCCCGTACACGTCGGA 398
||.||||||||.||.|||||.||.|||||.|||||.|||||.|||||.||
RBAM_011700__ 349 TCAGAACAGCTACTCGAAGAGGGATTTATCGTGCTTCCGTATACGTCAGA 398
BSNT_01952___ 399 TGACGTTGTGCTGGCGAGAAAGCTGGAAGAGCTCGGCGTTCATGCCATCA 448
|||.||||||||.||.|||...||.||.||||||||.||.||||||||.|
RBAM_011700__ 399 TGATGTTGTGCTCGCAAGACGTCTTGAGGAGCTCGGAGTGCATGCCATTA 448
BSNT_01952___ 449 TGCCGGGTGCATCTCCGATTGGATCAGGACAAGGAATCTTAAATCCTTTG 498
|||||||.||.||.|||||.||.||.||.||.|||||.||||||||..||
RBAM_011700__ 449 TGCCGGGCGCTTCGCCGATCGGTTCCGGTCAGGGAATTTTAAATCCGCTG 498
BSNT_01952___ 499 AATCTGTCGTTTATTATTGAACAGGCGAAAGTGCCGGTCATCGTGGATGC 548
|||||.||.|||||.||||||||||||||.|||||||||||.||.|||||
RBAM_011700__ 499 AATCTATCCTTTATCATTGAACAGGCGAAGGTGCCGGTCATTGTCGATGC 548
BSNT_01952___ 549 TGGAATCGGCTCGCCTAAAGATGCGGCATACGCCATGGAGCTTGGAGCGG 598
.||..||||.||..|.|||||.||.||.|||||.||||||||.||.||.|
RBAM_011700__ 549 CGGCGTCGGATCTTCAAAAGACGCCGCCTACGCGATGGAGCTCGGGGCTG 598
BSNT_01952___ 599 ATGGCGTACTGCTCAATACGGCTGTATCGGGCGCTGACGATCCTGTGAAA 648
|.|||||.|||.|.|||||.|||||.||.||||||||.|||||.||.||.
RBAM_011700__ 599 ACGGCGTGCTGTTAAATACCGCTGTGTCAGGCGCTGATGATCCGGTCAAG 648
BSNT_01952___ 649 ATGGCTCGTGCCATGAAGCTCGCGGTGGAAGCAGGACGCCTTTCTTATGA 698
|||||.||.||.||||||||.||.||.|||||.||.||||||||||||||
RBAM_011700__ 649 ATGGCCCGGGCGATGAAGCTTGCCGTAGAAGCGGGCCGCCTTTCTTATGA 698
BSNT_01952___ 699 GGCGGGCCGAATCCCGCTTAAGCAATACGGAACGGCAAGCAGTCCGGTAG 748
.|||||..||||.|||.|.||..|.||||||||.||||||||||||..||
RBAM_011700__ 699 AGCGGGGAGAATTCCGGTGAAAGATTACGGAACTGCAAGCAGTCCGCGAG 748
BSNT_01952___ 749 AAGGTCTTCCTGTATGA 765
|.||||||||.||||||
RBAM_011700__ 749 ACGGTCTTCCGGTATGA 765
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