Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01951 and RBAM_011690

See DNA alignment / Visit BSNT_01951 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:42
# Commandline: needle
#    -asequence pep-align/BSNT_01951___thiS.1.9828.seq
#    -bsequence pep-align/RBAM_011690___thiS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01951___thiS-RBAM_011690___thiS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01951___thiS-RBAM_011690___thiS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01951___thiS
# 2: RBAM_011690___thiS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 67
# Identity:      47/67 (70.1%)
# Similarity:    55/67 (82.1%)
# Gaps:           0/67 ( 0.0%)
# Score: 258.0
# 
#
#=======================================

BSNT_01951___      1 MMLQLNGKDVKWEKDAGTIQDLLASYQLDNKIVIVERNKEIIGKERYHEV     50
                     |:||||||.:.|.::.||:||||.|||||.:||:||||||||.|:.|...
RBAM_011690__      1 MILQLNGKQIDWNRNEGTVQDLLESYQLDQRIVVVERNKEIIEKKNYENT     50

BSNT_01951___     51 ELCDRDVIEIVHFVGGG     67
                     .||||||||||||||||
RBAM_011690__     51 SLCDRDVIEIVHFVGGG     67


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