Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01951 and RBAM_011690
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:42
# Commandline: needle
# -asequence dna-align/BSNT_01951___thiS.1.9828.seq
# -bsequence dna-align/RBAM_011690___thiS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01951___thiS-RBAM_011690___thiS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01951___thiS-RBAM_011690___thiS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01951___thiS
# 2: RBAM_011690___thiS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 218
# Identity: 155/218 (71.1%)
# Similarity: 155/218 (71.1%)
# Gaps: 28/218 (12.8%)
# Score: 545.0
#
#
#=======================================
BSNT_01951___ 1 ATGATGCTACAGCTGAACGGTAAAGACGTGAAGTG---GGA----AAAAG 43
|||||.||.|||||||||||.|||.| ||.|| ||| |||.|
RBAM_011690__ 1 ATGATCCTTCAGCTGAACGGAAAACA----AATTGATTGGAATCGAAATG 46
BSNT_01951___ 44 ACGCAGGTACAATTCAAGACCTGCTGGCGTCTTATCAGCTTGATAATAAA 93
| .||.||..||||.||..||||.|..||.||.|||||||||.|.|.|
RBAM_011690__ 47 A---GGGGACGGTTCAGGATTTGCTTGAATCGTACCAGCTTGATCAAAGA 93
BSNT_01951___ 94 ATCGTTATCGTGGAAAGAAATAAAGAAATAATCGGGAAAGAACG--CTAT 141
|||||..|.|||||.||||||||||||||.|| .||||.||.| .|||
RBAM_011690__ 94 ATCGTAGTTGTGGAGAGAAATAAAGAAATCAT--TGAAAAAAAGAATTAT 141
BSNT_01951___ 142 -----CACGAGGTTGAGCTTTGTGATCGTGATGTCATTGAAATTGTCCAT 186
.|||||.||| |||||.||.||||||||.||||||||||||
RBAM_011690__ 142 GAAAATACGAGTTTG-----TGTGACCGCGATGTCATAGAAATTGTCCAT 186
BSNT_01951___ 187 TTTGTAGGAGGCGGATGA 204
||||||||||||||||||
RBAM_011690__ 187 TTTGTAGGAGGCGGATGA 204
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