Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01944 and RBAM_011640

See DNA alignment / Visit BSNT_01944 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:41
# Commandline: needle
#    -asequence pep-align/BSNT_01944___prpE.1.9828.seq
#    -bsequence pep-align/RBAM_011640___yjbP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01944___prpE-RBAM_011640___yjbP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01944___prpE-RBAM_011640___yjbP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01944___prpE
# 2: RBAM_011640___yjbP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 249
# Identity:     204/249 (81.9%)
# Similarity:   224/249 (90.0%)
# Gaps:           5/249 ( 2.0%)
# Score: 1112.0
# 
#
#=======================================

BSNT_01944___      1 MAYDIISDIHGCYDEMTALIQKLGYTIKNGVPVHEEGRVLVFAGDLTDRG     50
                     ||||||||||||||||.||:|||||.:|:|.|||.|.|.|||||||||||
RBAM_011640__      1 MAYDIISDIHGCYDEMIALMQKLGYEVKDGTPVHSEDRTLVFAGDLTDRG     50

BSNT_01944___     51 PKSIEVIRFVAGAYEKGAVRYVPGNHCNKLYRYLKGNPVKVMHGLETTAA    100
                     |||:||:||||.||||||||||||||||||||||||||||||||||||||
RBAM_011640__     51 PKSVEVMRFVAKAYEKGAVRYVPGNHCNKLYRYLKGNPVKVMHGLETTAA    100

BSNT_01944___    101 ELEELSKDEKKSVSEQFMKLYETAPLYDILHNGELVVAHAGIRADDIGKY    150
                     ||:|||..::..||.||::|||:||||||||||:||||||||:|||||||
RBAM_011640__    101 ELKELSPADRTEVSRQFIRLYESAPLYDILHNGDLVVAHAGIKADDIGKY    150

BSNT_01944___    151 TRRVKDFVLYGDVTGETYPDGRPVRRDWAAAYNGKAWVVYGHTPVKEPRK    200
                     :|:||:||||||:||||:||||||||||||||.||||:||||||||.||.
RBAM_011640__    151 SRKVKEFVLYGDITGETHPDGRPVRRDWAAAYEGKAWIVYGHTPVKRPRI    200

BSNT_01944___    201 VNRTINIDTGCVFGNQLTGFRFPEIETVSVPSSLPYDESRFRPI-----    244
                     ||||||||||||||||||||||||.|||||.||:|||.||||..     
RBAM_011640__    201 VNRTINIDTGCVFGNQLTGFRFPEHETVSVESSMPYDASRFREDHGRQA    249


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