Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01944 and RBAM_011640
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:41
# Commandline: needle
# -asequence dna-align/BSNT_01944___prpE.1.9828.seq
# -bsequence dna-align/RBAM_011640___yjbP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01944___prpE-RBAM_011640___yjbP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01944___prpE-RBAM_011640___yjbP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01944___prpE
# 2: RBAM_011640___yjbP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 783
# Identity: 565/783 (72.2%)
# Similarity: 565/783 (72.2%)
# Gaps: 81/783 (10.3%)
# Score: 2090.0
#
#
#=======================================
BSNT_01944___ 1 ATGGCTTACGATATCATCAGCGATATTCATGGCTGCTATGATGAAATGAC 50
||||||||.||.||||||||||||||.||.||.||.|||||.|||||||.
RBAM_011640__ 1 ATGGCTTATGACATCATCAGCGATATACACGGATGTTATGACGAAATGAT 50
BSNT_01944___ 51 TGCATTAATCCAAAAGCTTGGCTATACAATCAAAAATGGAGTACCTGTCC 100
.||.|||||.||||||||.||.|||..|.|||||.|.|||...||.||.|
RBAM_011640__ 51 CGCGTTAATGCAAAAGCTCGGATATGAAGTCAAAGACGGAACGCCCGTTC 100
BSNT_01944___ 101 A---TGAAGAAGGCAGGGTGCTTGTTTTTGCCGGAGATTTAACTGACAGA 147
| |||||| ||||..||||||.|||||.||.||||||||.||||||
RBAM_011640__ 101 ACTCTGAAGA---CAGGACGCTTGTCTTTGCGGGGGATTTAACGGACAGA 147
BSNT_01944___ 148 GGGCCCAAATCGATAGAGGTCATCCGATTTGTAGCCGGC----GCTTACG 193
||.||.|||||..||||.||.||.||.||||| ||| ||.||.|
RBAM_011640__ 148 GGCCCAAAATCCGTAGAAGTGATGCGTTTTGT----GGCAAAAGCATATG 193
BSNT_01944___ 194 AAAAAGGCGCTGTGCGTTATGTCCCGGGAAACCATTGCAATAAATTATAT 243
|||||||.||.||.|||||||||||||||||.||||||||.|||.|.|||
RBAM_011640__ 194 AAAAAGGAGCCGTCCGTTATGTCCCGGGAAATCATTGCAACAAACTGTAT 243
BSNT_01944___ 244 CGTTACTTAAAAGGAAATCCGGTAAAAGTGATGCATGGTCTCGAAACAAC 293
|||||||||||||||||.||.||||||||||||||.||.||.|||||.||
RBAM_011640__ 244 CGTTACTTAAAAGGAAACCCCGTAAAAGTGATGCACGGACTGGAAACGAC 293
BSNT_01944___ 294 AGCGGC---------AGAGCT-------------TGA--GGAACTTTCCA 319
.||.|| |||||| .|| ||||.|.||||
RBAM_011640__ 294 GGCAGCCGAACTGAAAGAGCTGTCTCCCGCCGACAGAACGGAAGTCTCCA 343
BSNT_01944___ 320 AAGATGAGAAAAAATCAGTCAGCGAACAGTT-TATGAAGCTGTACGAAAC 368
.|.||.||| ||.|| || ||||| || |
RBAM_011640__ 344 --------GACAATTCA-TCCGC------TTATATGA----GT------C 368
BSNT_01944___ 369 AGCGCCGCTTTACGACATCTTACATAATGGAGAATTAGTTGTCGCCCATG 418
||||||||||||.|||||.|||||||||||.||..|.|||||||||||.|
RBAM_011640__ 369 AGCGCCGCTTTATGACATTTTACATAATGGCGATCTCGTTGTCGCCCACG 418
BSNT_01944___ 419 CTGGCATAAGAGCTGACGATATCGGCAAATATACCCGCAGAGTGAAGGAC 468
|.|||||||.|||||||||||||||.|||||..|.||.|..||.||.||.
RBAM_011640__ 419 CCGGCATAAAAGCTGACGATATCGGTAAATACTCGCGTAAGGTAAAAGAA 468
BSNT_01944___ 469 TTTGTGCTTTACGGTGACGTGACGGGTGAAACATATCCGGACGGCAGACC 518
|||||.||.|||||.||..|.|||||||||||..||||.|||||||||||
RBAM_011640__ 469 TTTGTTCTGTACGGCGATATCACGGGTGAAACGCATCCCGACGGCAGACC 518
BSNT_01944___ 519 CGTCAGACGTGATTGGGCGGCAGCCTATAACGGAAAGGCTTGGGTGGTAT 568
|||||||.|.||.|||||.||.||.|||.|.||.|||||.|||.|.||.|
RBAM_011640__ 519 CGTCAGAAGAGACTGGGCCGCCGCTTATGAAGGCAAGGCATGGATTGTTT 568
BSNT_01944___ 569 ACGGTCATACACCTGTGAAAGAACCTCGAAAGGTCAATCGCACCATCAAC 618
||||.|||||.||.||.|||...||.||.|..|||||.||.||.||||||
RBAM_011640__ 569 ACGGCCATACCCCGGTAAAACGCCCACGGATCGTCAACCGTACAATCAAC 618
BSNT_01944___ 619 ATTGATACAGGCTGCGTGTTCGGAAATCAACTGACAGGCTTTCGCTTTCC 668
|||||||||||.|||||.|||||.||||||||||||||||||||||||||
RBAM_011640__ 619 ATTGATACAGGATGCGTCTTCGGCAATCAACTGACAGGCTTTCGCTTTCC 668
BSNT_01944___ 669 AGA-AATAGAAACCGTCTCTGTTCCAAGCTCCTTGCCTTACGACGAATCA 717
.|| .|| ||||||||||||||...||||||..||||.||.||.|..|||
RBAM_011640__ 669 GGAGCAT-GAAACCGTCTCTGTGGAAAGCTCAATGCCCTATGATGCTTCA 717
BSNT_01944___ 718 AGATTTCGC----CCCATATAA----------- 735
.|||||||| ..||...||
RBAM_011640__ 718 CGATTTCGCGAGGATCACGGAAGGCAGGCATGA 750
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