Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01942 and RBAM_011620

See DNA alignment / Visit BSNT_01942 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:41
# Commandline: needle
#    -asequence pep-align/BSNT_01942___ppnK.1.9828.seq
#    -bsequence pep-align/RBAM_011620___ppnK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01942___ppnK-RBAM_011620___ppnK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01942___ppnK-RBAM_011620___ppnK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01942___ppnK
# 2: RBAM_011620___ppnK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 266
# Identity:     253/266 (95.1%)
# Similarity:   260/266 (97.7%)
# Gaps:           0/266 ( 0.0%)
# Score: 1323.0
# 
#
#=======================================

BSNT_01942___      1 MKFAVSSKGDQVSDTLKSKIQAYLLDFDMELDENEPEIVISVGGDGTLLY     50
                     ||||||||||:||||||||||||||||||.|||.||||||||||||||||
RBAM_011620__      1 MKFAVSSKGDEVSDTLKSKIQAYLLDFDMTLDEKEPEIVISVGGDGTLLY     50

BSNT_01942___     51 AFHRYSDRLDKTAFVGVHTGHLGFYADWVPHEIEKLVLAIAKTPYHTVEY    100
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
RBAM_011620__     51 AFHRYSDRLDKTAFVGVHTGHLGFYADWVPQEIEKLVLAIAKTPYHTVEY    100

BSNT_01942___    101 PLLEVIVTYHENEREERYLALNECTIKSIEGSLVADVEIKGQLFETFRGD    150
                     ||||||||||:.||||||||||||||||||||||||||||||||||||||
RBAM_011620__    101 PLLEVIVTYHDEEREERYLALNECTIKSIEGSLVADVEIKGQLFETFRGD    150

BSNT_01942___    151 GLCLSTPSGSTAYNKALGGAIIHPSIRAIQLAEMASINNRVFRTVGSPLL    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_011620__    151 GLCLSTPSGSTAYNKALGGAIIHPSIRAIQLAEMASINNRVFRTVGSPLL    200

BSNT_01942___    201 LPSHHDCMIKPRNEVDFQVTIDHLTLLHKDVKSIRCQVASEKVRFARFRP    250
                     ||.||:|:|||||:||||||||||||||||||||.|:||:||||||||||
RBAM_011620__    201 LPDHHNCVIKPRNDVDFQVTIDHLTLLHKDVKSILCRVANEKVRFARFRP    250

BSNT_01942___    251 FPFWKRVQDSFIGKGE    266
                     ||||||||||||||||
RBAM_011620__    251 FPFWKRVQDSFIGKGE    266


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.