Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01941 and RBAM_011610

See DNA alignment / Visit BSNT_01941 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:41
# Commandline: needle
#    -asequence pep-align/BSNT_01941___yjbM.1.9828.seq
#    -bsequence pep-align/RBAM_011610___yjbM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01941___yjbM-RBAM_011610___yjbM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01941___yjbM-RBAM_011610___yjbM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01941___yjbM
# 2: RBAM_011610___yjbM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 212
# Identity:     138/212 (65.1%)
# Similarity:   145/212 (68.4%)
# Gaps:          54/212 (25.5%)
# Score: 702.0
# 
#
#=======================================

BSNT_01941___      1 MMDDKQWERFLVPYRQAVEELKVKLKGIRTLYEYEDDHSPIEFVTGRVKP     50
                                                                       
RBAM_011610__      0 --------------------------------------------------      0

BSNT_01941___     51 VASILEKARRKSIPLHEIETMQDIAGLRIMCQFVDDIQIVKEMLFARKDF    100
                         ::|...|:.....:|||||||||||||||||||||||.||||||||
RBAM_011610__      1 ----MKKRDEKAYRFIRVETMQDIAGLRIMCQFVDDIQIVKNMLFARKDF     46

BSNT_01941___    101 TVVDQRDYIAEHKESGYRSYHLVVLYPLQTVSGEKHVLVEIQIRTLAMNF    150
                     ||||:|||||||||||||||||||||||||.|||||||||||||||||||
RBAM_011610__     47 TVVDKRDYIAEHKESGYRSYHLVVLYPLQTTSGEKHVLVEIQIRTLAMNF     96

BSNT_01941___    151 WATIEHSLNYKYSGNIPEKVKLRLQRASEAASRLDEEMSEIRGEVQEAQA    200
                     ||||||||||||||||||||||||||||||||||||||||||||:|||||
RBAM_011610__     97 WATIEHSLNYKYSGNIPEKVKLRLQRASEAASRLDEEMSEIRGEIQEAQA    146

BSNT_01941___    201 AFSRKKKGSEQQ    212
                     |||||||..:.|
RBAM_011610__    147 AFSRKKKAGDHQ    158


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