Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01941 and RBAM_011610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:41
# Commandline: needle
# -asequence pep-align/BSNT_01941___yjbM.1.9828.seq
# -bsequence pep-align/RBAM_011610___yjbM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01941___yjbM-RBAM_011610___yjbM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01941___yjbM-RBAM_011610___yjbM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01941___yjbM
# 2: RBAM_011610___yjbM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 212
# Identity: 138/212 (65.1%)
# Similarity: 145/212 (68.4%)
# Gaps: 54/212 (25.5%)
# Score: 702.0
#
#
#=======================================
BSNT_01941___ 1 MMDDKQWERFLVPYRQAVEELKVKLKGIRTLYEYEDDHSPIEFVTGRVKP 50
RBAM_011610__ 0 -------------------------------------------------- 0
BSNT_01941___ 51 VASILEKARRKSIPLHEIETMQDIAGLRIMCQFVDDIQIVKEMLFARKDF 100
::|...|:.....:|||||||||||||||||||||||.||||||||
RBAM_011610__ 1 ----MKKRDEKAYRFIRVETMQDIAGLRIMCQFVDDIQIVKNMLFARKDF 46
BSNT_01941___ 101 TVVDQRDYIAEHKESGYRSYHLVVLYPLQTVSGEKHVLVEIQIRTLAMNF 150
||||:|||||||||||||||||||||||||.|||||||||||||||||||
RBAM_011610__ 47 TVVDKRDYIAEHKESGYRSYHLVVLYPLQTTSGEKHVLVEIQIRTLAMNF 96
BSNT_01941___ 151 WATIEHSLNYKYSGNIPEKVKLRLQRASEAASRLDEEMSEIRGEVQEAQA 200
||||||||||||||||||||||||||||||||||||||||||||:|||||
RBAM_011610__ 97 WATIEHSLNYKYSGNIPEKVKLRLQRASEAASRLDEEMSEIRGEIQEAQA 146
BSNT_01941___ 201 AFSRKKKGSEQQ 212
|||||||..:.|
RBAM_011610__ 147 AFSRKKKAGDHQ 158
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