Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01941 and RBAM_011610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:41
# Commandline: needle
# -asequence dna-align/BSNT_01941___yjbM.1.9828.seq
# -bsequence dna-align/RBAM_011610___yjbM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01941___yjbM-RBAM_011610___yjbM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01941___yjbM-RBAM_011610___yjbM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01941___yjbM
# 2: RBAM_011610___yjbM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 640
# Identity: 387/640 (60.5%)
# Similarity: 387/640 (60.5%)
# Gaps: 164/640 (25.6%)
# Score: 1569.0
#
#
#=======================================
BSNT_01941___ 1 ATGATGGATGACAAACAATGGGAGCGTTTTTTAGTGCCGTACCGCCAGGC 50
RBAM_011610__ 0 -------------------------------------------------- 0
BSNT_01941___ 51 TGTCGAAGAGTTGAAAGTGAAGCTCAAGGGGATCCGCACACTATATGAAT 100
RBAM_011610__ 0 -------------------------------------------------- 0
BSNT_01941___ 101 ACGAGGACGACCATTCACCGATCGAATTTGTGACCGGACGCGTCAAGCCT 150
RBAM_011610__ 0 -------------------------------------------------- 0
BSNT_01941___ 151 GTGGCGAGCATTCTTGAAAAAGCGAGACGGAAAAGCATACCGCTGCATGA 200
||||||||||||||||.||||||||||||||.|||.|
RBAM_011610__ 1 -------------TTGAAAAAGCGAGACGAAAAAGCATACCGCTTCATCA 37
BSNT_01941___ 201 -AATTGAAACCATGCAGGACATTGCTGGCCTTAGAATCATGTGCCAATTT 249
|.|||||||.||||||||.||.||.||.||..|.||.|||||||||||.
RBAM_011610__ 38 GAGTTGAAACGATGCAGGATATCGCGGGGCTGCGTATTATGTGCCAATTC 87
BSNT_01941___ 250 GTCGATGACATCCAAATCGTAAAAGAGATGCTTTTTGCCAGAAAAGATTT 299
||||||||.|||||.|||||.|||.|.|||||.|||||||||||||||||
RBAM_011610__ 88 GTCGATGATATCCAGATCGTCAAAAATATGCTGTTTGCCAGAAAAGATTT 137
BSNT_01941___ 300 CACCGTTGTGGATCAGAGGGATTATATTGCGGAACATAAAGAGAGCGGAT 349
.||||||||.|||.||.|||||||.||.||.||.|||||.||.|||||||
RBAM_011610__ 138 TACCGTTGTCGATAAGCGGGATTACATAGCAGAGCATAAGGAAAGCGGAT 187
BSNT_01941___ 350 ACCGGTCATACCATCTTGTTGTGCTGTACCCTTTGCAGACGGTATCCGGA 399
|.|||||.|||||.|||||.||..|.||.|||||.||.||....||||||
RBAM_011610__ 188 ATCGGTCTTACCACCTTGTCGTTTTATATCCTTTACAAACAACGTCCGGA 237
BSNT_01941___ 400 GAAAAGCATGTTCTCGTAGAAATACAGATCCGTACACTGGCGATGAATTT 449
||||||||.|||||.||.|||||||||||.||.||.||.||.|||||.||
RBAM_011610__ 238 GAAAAGCACGTTCTTGTGGAAATACAGATTCGGACGCTTGCCATGAACTT 287
BSNT_01941___ 450 TTGGGCGACCATTGAACATTCATTGAATTATAAATACAGCGGAAACATTC 499
||||||.||||||||.||||||.|||||||.|||||||||||.|||||||
RBAM_011610__ 288 TTGGGCAACCATTGAGCATTCACTGAATTACAAATACAGCGGGAACATTC 337
BSNT_01941___ 500 CTGAAAAAGTAAAACTAAGGCTTCAGCGCGCTTCTGAAGCGGCTTCCCGG 549
|.|||||||||||.||.|||||.|||||.||.||.|||||.||.||||||
RBAM_011610__ 338 CCGAAAAAGTAAAGCTGAGGCTGCAGCGGGCCTCAGAAGCCGCATCCCGG 387
BSNT_01941___ 550 CTTGATGAAGAGATGTCGGAGATCAGGGGTGAAGTACAGGAAGCTCAAGC 599
||.||||||||.|||||.||.|||.|.||.|||.|.||||||||.|||||
RBAM_011610__ 388 CTCGATGAAGAAATGTCAGAAATCCGCGGAGAAATCCAGGAAGCCCAAGC 437
BSNT_01941___ 600 TGCCTTTTCAAGAAAGAAAAAAGGAAGCGAGCAACAATAG 639
.||.||.||..||||||||||||...|.||.||.||.|||
RBAM_011610__ 438 CGCGTTCTCGCGAAAGAAAAAAGCGGGAGACCACCAGTAG 477
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