Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01940 and RBAM_011600

See DNA alignment / Visit BSNT_01940 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:41
# Commandline: needle
#    -asequence pep-align/BSNT_01940___yjbL.1.9828.seq
#    -bsequence pep-align/RBAM_011600___yjbL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01940___yjbL-RBAM_011600___yjbL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01940___yjbL-RBAM_011600___yjbL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01940___yjbL
# 2: RBAM_011600___yjbL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 122
# Identity:      91/122 (74.6%)
# Similarity:   106/122 (86.9%)
# Gaps:           1/122 ( 0.8%)
# Score: 459.0
# 
#
#=======================================

BSNT_01940___      1 MQNRIEILNATLSDDQLRLTCQTEGNEAERKPSGQMLVDSDHFAFVYILE     50
                     ||.||||.||:|::|.|||.|..:.:.||||.||||||||||||||||||
RBAM_011600__      1 MQKRIEIQNASLTEDALRLKCGEDLSGAERKASGQMLVDSDHFAFVYILE     50

BSNT_01940___     51 LADSFEYVIIKEHVWPELKQAHAQKIPVVLEAGDQTIELAGLHEELEYLL    100
                     .||||||||||||:||:||:|..|:.|.|||||.:|:||:||||||:|||
RBAM_011600__     51 SADSFEYVIIKEHIWPDLKEALDQRKPAVLEAGGKTVELSGLHEELDYLL    100

BSNT_01940___    101 ENIKDNANYGEEMEEKVKHVFL    122
                     |||||||||| :||||||:|||
RBAM_011600__    101 ENIKDNANYG-DMEEKVKNVFL    121


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