Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01938 and RBAM_011590
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:41
# Commandline: needle
# -asequence pep-align/BSNT_01938___yjbK.1.9828.seq
# -bsequence pep-align/RBAM_011590___yjbK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01938___yjbK-RBAM_011590___yjbK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01938___yjbK-RBAM_011590___yjbK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01938___yjbK
# 2: RBAM_011590___yjbK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 191
# Identity: 125/191 (65.4%)
# Similarity: 157/191 (82.2%)
# Gaps: 2/191 ( 1.0%)
# Score: 650.0
#
#
#=======================================
BSNT_01938___ 1 MSQEIEIEFKNMLTKQEFKNIAAALQLTEKDFTDQKNHYFDTDSFALKQK 50
|:|||||||||:|||.||..::.||.:.|.||..|.||||||:.|:||||
RBAM_011590__ 1 MTQEIEIEFKNLLTKSEFLKLSEALCMKEHDFKQQVNHYFDTEDFSLKQK 50
BSNT_01938___ 51 QAALRIRRKNGKYVLTLKEPADVGLLETHQQLSEVSDLAGFSVPEGPVKD 100
::|||||.|:|.:||||||||.||||||||:|: ..||..|.:|:||||.
RBAM_011590__ 51 KSALRIREKDGAFVLTLKEPAAVGLLETHQELA-APDLDVFKIPDGPVKR 99
BSNT_01938___ 101 QLHKLQIDTDAIQYFGSLATNRAEKETEKGLIVLDHSRYLNKEDYEIEFE 150
||..|.|:::.|.|||:|:|.|||||:|||||:|||||||.|||:|:|||
RBAM_011590__ 100 QLEGLGINSEHICYFGTLSTARAEKESEKGLIILDHSRYLEKEDFELEFE 149
BSNT_01938___ 151 AADWHEGRKAFEKLLQQFSIPQRETKNKILRFYEEKRKSI- 190
||||.||::|||:||:||.||:|.|||||.||||:|:|.:
RBAM_011590__ 150 AADWDEGKRAFEQLLKQFGIPERITKNKIQRFYEQKQKKVE 190
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