Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01936 and RBAM_011580
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:41
# Commandline: needle
# -asequence pep-align/BSNT_01936.1.9828.seq
# -bsequence pep-align/RBAM_011580___yjbJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01936-RBAM_011580___yjbJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01936-RBAM_011580___yjbJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01936
# 2: RBAM_011580___yjbJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 247
# Identity: 160/247 (64.8%)
# Similarity: 186/247 (75.3%)
# Gaps: 22/247 ( 8.9%)
# Score: 730.0
#
#
#=======================================
BSNT_01936 1 MNVTNWAALLQLQ--ALQSISNARSSSDTQNTESPLSSFSSLLSQYTNGL 48
||:|||||||||| ||||||:..::|..|::||||::||:||||||:..
RBAM_011580__ 1 MNITNWAALLQLQSMALQSISHTSTASGGQSSESPLANFSALLSQYTDTA 50
BSNT_01936 49 TSQQSALSSSPSPLS-MLNSANTTAPSLLSAYGLNSYTSSNSSSVTKAAE 97
..|| |.| :||...|...| |......||.|::.::.|
RBAM_011580__ 51 VRQQ--------PESGILNGVRTAHAS----YSPRIPVSSGSAAASQTA- 87
BSNT_01936 98 STETAAADSASNKHEANQISSGDFSIDSAIKKAADKYGVDEKLIRAVIKQ 147
|....:.|:||: ||:|:|||||||:|||:|||||||||||||||
RBAM_011580__ 88 SPGIKSPDAASD------ISTGNFSIDSAIQKAAEKYGVDEKLIRAVIKQ 131
BSNT_01936 148 ESGFNAKAVSGAGAMGLMQLMPSTASSLGVSNPLDPQQNVEGGTKYLKQM 197
||||:.|||||||||||||||||||.||||||||||.||.||||||||||
RBAM_011580__ 132 ESGFDPKAVSGAGAMGLMQLMPSTAESLGVSNPLDPVQNAEGGTKYLKQM 181
BSNT_01936 198 LDKYGGNVSMALAAYNAGPGNVDRYGGIPPFQETKNYVKKITSAYYA 244
|.||.||||:|||||||||||||||||||||:||:.|||.||..|||
RBAM_011580__ 182 LTKYDGNVSLALAAYNAGPGNVDRYGGIPPFKETQQYVKNITKQYYA 228
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