Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01931 and RBAM_011550

See DNA alignment / Visit BSNT_01931 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:41
# Commandline: needle
#    -asequence pep-align/BSNT_01931.1.9828.seq
#    -bsequence pep-align/RBAM_011550.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01931-RBAM_011550.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01931-RBAM_011550.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01931
# 2: RBAM_011550
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 55
# Identity:      41/55 (74.5%)
# Similarity:    46/55 (83.6%)
# Gaps:           0/55 ( 0.0%)
# Score: 212.0
# 
#
#=======================================

BSNT_01931         1 MMSTLISIVCIAVFFCLNILGMMHMLPLYITSPLLFLSILFTLYRLNHRK     50
                     |:.|::.|..|..||.||:|.||||||:|||||||||||||.||||||||
RBAM_011550        1 MLRTVLIIGMIVFFFFLNLLAMMHMLPIYITSPLLFLSILFALYRLNHRK     50

BSNT_01931        51 TFKGF     55
                     |||||
RBAM_011550       51 TFKGF     55


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