Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01931 and RBAM_011550

See Amino acid alignment / Visit BSNT_01931 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:41
# Commandline: needle
#    -asequence dna-align/BSNT_01931.1.9828.seq
#    -bsequence dna-align/RBAM_011550.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01931-RBAM_011550.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01931-RBAM_011550.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01931
# 2: RBAM_011550
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 182
# Identity:     127/182 (69.8%)
# Similarity:   127/182 (69.8%)
# Gaps:          28/182 (15.4%)
# Score: 457.5
# 
#
#=======================================

BSNT_01931         1 ATGATG-TC-------TACTTTGATC-TC-----AATTGTGTGCATTGCC     36
                        ||| ||       ||  ||.||| ||     .|||||||        
RBAM_011550        1 ---ATGCTCCGCACCGTA--TTAATCATCGGAATGATTGTGT--------     37

BSNT_01931        37 GTTTTTTTCTGCTTGAATATCTTAGGCATGATGCATATGCTGCCGCTTTA     86
                      ||||.||||..||.||..|..|.|.|||||||||.|||||||||.||||
RBAM_011550       38 -TTTTCTTCTTTTTAAACCTGCTGGCCATGATGCACATGCTGCCGATTTA     86

BSNT_01931        87 TATTACCTCTCCTCTGCTGTTTCTGTCTATTTTGTTTACCCTCTACCGCT    136
                     .|||||.|||||.||||||||||||||.||.||||||.||||.||.||..
RBAM_011550       87 CATTACATCTCCCCTGCTGTTTCTGTCCATATTGTTTGCCCTGTATCGGC    136

BSNT_01931       137 TGAATCACCGGAAAACCTTTAAAGGGTTTTAA    168
                     ||||||||.|.|||||.|||||||||||||||
RBAM_011550      137 TGAATCACAGAAAAACATTTAAAGGGTTTTAA    168


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