Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01930 and RBAM_011540

See DNA alignment / Visit BSNT_01930 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:40
# Commandline: needle
#    -asequence pep-align/BSNT_01930___yjbG.1.9828.seq
#    -bsequence pep-align/RBAM_011540___yjbG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01930___yjbG-RBAM_011540___yjbG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01930___yjbG-RBAM_011540___yjbG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01930___yjbG
# 2: RBAM_011540___yjbG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 670
# Identity:     548/670 (81.8%)
# Similarity:   578/670 (86.3%)
# Gaps:          61/670 ( 9.1%)
# Score: 2885.0
# 
#
#=======================================

BSNT_01930___      1 MKGTKGKVFRVFTAFLAFVLFITAYDLTKGSEKPEDIHNTSLLRNSCFFN     50
                                                                       
RBAM_011540__      0 --------------------------------------------------      0

BSNT_01930___     51 WLESKKTRGITMAEEKKANQLPDRSEVKAEDTWRLEDIFPSDEAWNKEFQ    100
                                |.||.||.|||||||||||.|||||||||||||||||||
RBAM_011540__      1 -----------MTEENKAAQLPDRSEVKAEHTWRLEDIFPSDEAWNKEFQ     39

BSNT_01930___    101 AVKELIPNLSKYKGKLADSADHLYEALTYQDKVMERLGRLYTYAHMRSDQ    150
                     ||||||||||.:||.||.|||:||.|||.||:|..|||:||.||||||||
RBAM_011540__     40 AVKELIPNLSSFKGTLAHSADNLYAALTAQDEVTNRLGKLYAYAHMRSDQ     89

BSNT_01930___    151 DTGNSFYQGLNDKAGNLYTQAASATAYLVPEILSIEEDKLQQFILEKEEL    200
                     ||||||||||||||.:||:||||||||:.||||:|:||||.|||||||||
RBAM_011540__     90 DTGNSFYQGLNDKAASLYSQAASATAYIEPEILAIQEDKLHQFILEKEEL    139

BSNT_01930___    201 KLYSHAIEEITKERPHVLSEKEEALLAEASEVLGSSSNTFSVLNNADITF    250
                     ||||||||||||:|||||||:||||||||||.|.|.||||||||||||||
RBAM_011540__    140 KLYSHAIEEITKQRPHVLSEQEEALLAEASEALSSPSNTFSVLNNADITF    189

BSNT_01930___    251 PSIKDEDGNEKQITHGNFINFLESENREVRKNAFDAVYKTYGQYKNTMAT    300
                     ||||||:|.|.|||||||||||||.|||||||||:|||||||||||||||
RBAM_011540__    190 PSIKDENGKETQITHGNFINFLESSNREVRKNAFEAVYKTYGQYKNTMAT    239

BSNT_01930___    301 TLSGTVKKDNFYARVKKYKSAREAALSNNSIPEEVYDNLVKTINKHLPLL    350
                     |||||||||||||||||||||||||||||||||||||||:||||||||||
RBAM_011540__    240 TLSGTVKKDNFYARVKKYKSAREAALSNNSIPEEVYDNLIKTINKHLPLL    289

BSNT_01930___    351 HRYIALRKKVLELDEVHIYDLYTPLVKDAGMKVTYEEAKDYMLKGLAPLG    400
                     ||||.||||||.||||||||||||||||:|||||||||||||||||||||
RBAM_011540__    290 HRYIDLRKKVLGLDEVHIYDLYTPLVKDSGMKVTYEEAKDYMLKGLAPLG    339

BSNT_01930___    401 EEYASILKEGLENRWVDVYENKGKRNGAYSSGAYGTNPYILMNWHNNVNN    450
                     |||||||||||||||||:|||||||:||||||.||||||||||||:||||
RBAM_011540__    340 EEYASILKEGLENRWVDIYENKGKRSGAYSSGTYGTNPYILMNWHDNVNN    389

BSNT_01930___    451 LFTLVHEFGHSVHSYYTRKHQPYPYGNYSIFVAEVASTTNEALLGEYLLN    500
                     |||||||||||||||||||:|||||||||||||||||||||||||||:||
RBAM_011540__    390 LFTLVHEFGHSVHSYYTRKYQPYPYGNYSIFVAEVASTTNEALLGEYMLN    439

BSNT_01930___    501 NLEDEKQRLYILNHMLEGFRGTVFRQTMFAEFEHLIHTKAQEGEPLTPEL    550
                     :|:|||||||:|||||||||||||||||||||||||||||||||||||||
RBAM_011540__    440 SLKDEKQRLYLLNHMLEGFRGTVFRQTMFAEFEHLIHTKAQEGEPLTPEL    489

BSNT_01930___    551 LTKVYYDLNKKYFGDGMVIDKEIGLEWSRIPHFYYNYYVYQYATGYSAAQ    600
                     |.::|||||||||||.|||||||.||||||||||||||||||||||||||
RBAM_011540__    490 LNELYYDLNKKYFGDNMVIDKEISLEWSRIPHFYYNYYVYQYATGYSAAQ    539

BSNT_01930___    601 ALSSQILKEGKPAVDRYIDFLKAGSSQYPIDVLKKAGVDMTSPEPIEAAC    650
                     ||||||||||||||:||.:|||||||:||||:||||||||||||||||||
RBAM_011540__    540 ALSSQILKEGKPAVERYTEFLKAGSSEYPIDILKKAGVDMTSPEPIEAAC    589

BSNT_01930___    651 KMFEEKLDEMEELLMKVKQS    670
                     |||||||:||||||.||..|
RBAM_011540__    590 KMFEEKLNEMEELLSKVNPS    609


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