Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01930 and RBAM_011540
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:40
# Commandline: needle
# -asequence dna-align/BSNT_01930___yjbG.1.9828.seq
# -bsequence dna-align/RBAM_011540___yjbG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01930___yjbG-RBAM_011540___yjbG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01930___yjbG-RBAM_011540___yjbG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01930___yjbG
# 2: RBAM_011540___yjbG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2016
# Identity: 1486/2016 (73.7%)
# Similarity: 1486/2016 (73.7%)
# Gaps: 189/2016 ( 9.4%)
# Score: 6006.0
#
#
#=======================================
BSNT_01930___ 1 GTGAAAGGCACAAAAGGAAAGGTTTTTCGTGTTTTTACTGCTTTTTTGGC 50
RBAM_011540__ 0 -------------------------------------------------- 0
BSNT_01930___ 51 ATTCGTTCTCTTCATTACTGCATATGATTTGACAAAAGGCAGTGAAAAAC 100
RBAM_011540__ 0 -------------------------------------------------- 0
BSNT_01930___ 101 CGGAAGATATTCACAACACAAGTTTATTGAGAAACAGCTGTTTTTTCAAT 150
RBAM_011540__ 0 -------------------------------------------------- 0
BSNT_01930___ 151 TGGCTTGAATCAAAGAAGACGAGGGGGATCACCATGGCTGAGGAAAAAAA 200
|||.||||||||||.||
RBAM_011540__ 1 ---------------------------------ATGACTGAGGAAAATAA 17
BSNT_01930___ 201 AGCAAACCAACTGCCTGACAGAAGTGAGGTAAAGGCAGAAGACACATGGA 250
||||...||.|||||||||||||||||.|||||||||||..|.|||||||
RBAM_011540__ 18 AGCAGCACAGCTGCCTGACAGAAGTGAAGTAAAGGCAGAGCATACATGGA 67
BSNT_01930___ 251 GACTTGAGGATATTTTTCCTAGTGATGAGGCCTGGAATAAAGAATTTCAA 300
||||.|||||||||||||||||||||||||||||||||||||||||||||
RBAM_011540__ 68 GACTAGAGGATATTTTTCCTAGTGATGAGGCCTGGAATAAAGAATTTCAA 117
BSNT_01930___ 301 GCTGTAAAAGAATTAATTCCGAATTTATCTAAGTATAAAGGAAAGCTGGC 350
||.||.|||||||||||.||||||||||||...|.||||||.|.|||.||
RBAM_011540__ 118 GCAGTTAAAGAATTAATCCCGAATTTATCTTCTTTTAAAGGCACGCTTGC 167
BSNT_01930___ 351 AGATTCAGCTGATCATTTATACGAGGCTCTTACGTATCAAGATAAAGTGA 400
..||||.||||||.|||||||||.|||.||||||...||.|||.||||||
RBAM_011540__ 168 TCATTCGGCTGATAATTTATACGCGGCGCTTACGGCACAGGATGAAGTGA 217
BSNT_01930___ 401 TGGAGCGGCTGGGTAGGCTGTACACATATGCGCATATGCGCTCTGACCAG 450
.|.|.||.||.||.|..||.||..||||.||||||||||||||.||||||
RBAM_011540__ 218 CGAACCGCCTTGGGAAACTTTATGCATACGCGCATATGCGCTCAGACCAG 267
BSNT_01930___ 451 GATACTGGGAACTCCTTT-TACCAGGGGCTGAATGACAAGGCGGGAAACC 499
||||| |||||.|.|||| |||||.||||||||.|||||.||.|.||.||
RBAM_011540__ 268 GATAC-GGGAAATTCTTTCTACCAAGGGCTGAACGACAAAGCCGCAAGCC 316
BSNT_01930___ 500 TGTATACACAGGCTGCAAGCGCGACAGCTTATTTGGTTCCGGAGATTTTA 549
|||||.|.||||||||.||||||||.|||||..|.|..|||||.|||.|.
RBAM_011540__ 317 TGTATTCCCAGGCTGCCAGCGCGACTGCTTACATTGAACCGGAAATTCTG 366
BSNT_01930___ 550 TCCATAGAAGAAGACAAACTGCAGCAGTTCATTCTTGAAAAAGAAGA-AT 598
.|.||..|.||.|||||.|||||.|||||.|||||.||||||||.|| .|
RBAM_011540__ 367 GCGATTCAGGAGGACAAGCTGCACCAGTTTATTCTGGAAAAAGAGGAGCT 416
BSNT_01930___ 599 TAAAGCTGTACTCTCATGCGATTGAGGAGATTACAAAGGAACGTCCGCAT 648
|||| ||.|||||.|||||.|||||.||.||||||||..|.||||||||.
RBAM_011540__ 417 TAAA-CTTTACTCCCATGCAATTGAAGAAATTACAAAACAGCGTCCGCAC 465
BSNT_01930___ 649 GTGCTGAGCGAGAAGGAAGAGGCACTGCTTGCTGAAGCCTCCGAGGTACT 698
|||||||||||..|.||||||||.||||||||.||||||||.||.|..||
RBAM_011540__ 466 GTGCTGAGCGAACAAGAAGAGGCCCTGCTTGCGGAAGCCTCAGAAGCGCT 515
BSNT_01930___ 699 GGGGTCATCTTCAAATACATTCAGCGTGTTAAATAACGCAGATATAACGT 748
|..|||..||||.|||||||||||.||.|||||||||||.|||||.||||
RBAM_011540__ 516 GTCGTCGCCTTCCAATACATTCAGTGTTTTAAATAACGCCGATATTACGT 565
BSNT_01930___ 749 TTCCATCCATTAAAGACGAAGATGGGAATGAAAAACAGATCACTCACGGC 798
||||.||.||||||||.|||.|.||.||.||||..||.|||||.||||||
RBAM_011540__ 566 TTCCGTCGATTAAAGATGAAAACGGCAAGGAAACTCAAATCACACACGGC 615
BSNT_01930___ 799 AACTTTATTAATTTCTTGGAAAGTGAAAACCGTGAAGTCCGCAAAAATGC 848
|||||||||||||||.|||||||....||.|||||||||||||||||.||
RBAM_011540__ 616 AACTTTATTAATTTCCTGGAAAGCAGCAATCGTGAAGTCCGCAAAAACGC 665
BSNT_01930___ 849 GTTTGACGCAGTGTATAAAACGTACGGACAATATAAAAATACAATGGCCA 898
.|||||.||.||.||||||||.||||||||.||||||||.||.|||||.|
RBAM_011540__ 666 ATTTGAAGCCGTATATAAAACATACGGACAGTATAAAAACACGATGGCGA 715
BSNT_01930___ 899 CGACGCTTAGCGGCACTGTGAAAAAGGACAACTTCTACGCGAGAGTGAAA 948
|.||.||.|||||||||||||||||.||.||.||.|||||..|.||||||
RBAM_011540__ 716 CTACACTCAGCGGCACTGTGAAAAAAGATAATTTTTACGCCCGTGTGAAA 765
BSNT_01930___ 949 AAGTACAAGTCCGCGCGTGAGGCTGCGCTTTCTAACAACAGTATTCCTGA 998
||.||.||.||.||.||.||.||.||..|.||.||.|||||.||.|||||
RBAM_011540__ 766 AAATATAAATCAGCACGGGAAGCGGCTTTATCCAATAACAGCATCCCTGA 815
BSNT_01930___ 999 GGAAGTATACGATAACCTTGTTAAGACGATTAATAAGCATTTGCCGCTCC 1048
.|||||.||||||||||||.||||.|||||.|||||.|||.|.|||.|..
RBAM_011540__ 816 AGAAGTTTACGATAACCTTATTAAAACGATCAATAAACATCTTCCGTTAT 865
BSNT_01930___ 1049 TGCACCGCTATATTGCGCTAAGAAAGAAAGTGCTTGAGCTTGATGAAGTG 1098
|.|||||.||.||||..||..|.||.||.||.||.|..|||||||||||.
RBAM_011540__ 866 TACACCGTTACATTGACCTGCGGAAAAAGGTTCTCGGCCTTGATGAAGTC 915
BSNT_01930___ 1099 CATATCTATGACCTGTATACACCGCTTGTGAAAGATGCTGGGATGAAGGT 1148
|||||.||||||||.||.|||||||||||.||||||.|.||.||||||||
RBAM_011540__ 916 CATATTTATGACCTTTACACACCGCTTGTAAAAGATTCGGGAATGAAGGT 965
BSNT_01930___ 1149 GACATACGAGGAAGCCAAAGATTACATGCTGAAAGGCCTTGCACCTTTAG 1198
.|||||.||||||||.||||||||.|||||.|||||.|||||.||..|.|
RBAM_011540__ 966 CACATATGAGGAAGCGAAAGATTATATGCTCAAAGGACTTGCTCCGCTGG 1015
BSNT_01930___ 1199 GGGAAGAATATGCCTCTATCCTAAAAGAAGGACTGGAAAACCGCTGGGTG 1248
|.||.|||||.||.|||||..|||||||||||||.||||||||||||||.
RBAM_011540__ 1016 GCGAGGAATACGCGTCTATTTTAAAAGAAGGACTTGAAAACCGCTGGGTC 1065
BSNT_01930___ 1249 GACGTTTACGAAAATAAAGGCAAACGCAATGGGGCTTATTCATCAGGAGC 1298
||..|.||||||||||||||.|||||||..||.||||||||.||.||..|
RBAM_011540__ 1066 GATATATACGAAAATAAAGGAAAACGCAGCGGTGCTTATTCGTCCGGTAC 1115
BSNT_01930___ 1299 TTACGGCACGAATCCGTATATTTTGATGAACTGGCATAATAACGTCAATA 1348
.|||||||||||||||||.||.|||||||||||||||.|.||.|||||||
RBAM_011540__ 1116 ATACGGCACGAATCCGTACATCTTGATGAACTGGCATGACAATGTCAATA 1165
BSNT_01930___ 1349 ATCTCTTTACGCTCGTGCACGAGTTTGGACATTCCGTACACAGCTACTAT 1398
||||.|||||||||||.||||||||.||.||||||||.||||||||||||
RBAM_011540__ 1166 ATCTGTTTACGCTCGTTCACGAGTTCGGCCATTCCGTGCACAGCTACTAT 1215
BSNT_01930___ 1399 ACGAGAAAGCACCAGCCTTATCCATATGGCAATTACAGCATCTTTGTCGC 1448
||||||||..|.|||||.|||||.||.||.||.||||||||.||||||||
RBAM_011540__ 1216 ACGAGAAAATATCAGCCGTATCCGTACGGTAACTACAGCATTTTTGTCGC 1265
BSNT_01930___ 1449 GGAAGTTGCCTCTACGACAAATGAAGCGCTCCTTGGCGAATATCTGCTGA 1498
.||||||||.||.|||||.|||||||||||.||.||.||||||.||||||
RBAM_011540__ 1266 TGAAGTTGCTTCAACGACCAATGAAGCGCTGCTCGGTGAATATATGCTGA 1315
BSNT_01930___ 1499 ACAATTTAGAGGATGAAAAACAGCGCTTATATATTCTCAACCATATGCTT 1548
|||..|||.||||||||||||||||..|.||..|.||||||||.||||||
RBAM_011540__ 1316 ACAGCTTAAAGGATGAAAAACAGCGTCTGTACCTGCTCAACCACATGCTT 1365
BSNT_01930___ 1549 GAGGGCTTCAGGGGAACGGTTTTCAGACAAACGATGTTCGCTGAATTTGA 1598
||.||.|||||.||.||.||.||||||||.||||||||||||||||||||
RBAM_011540__ 1366 GAAGGATTCAGAGGCACAGTGTTCAGACAGACGATGTTCGCTGAATTTGA 1415
BSNT_01930___ 1599 ACATCTGATCCATACAAAGGCGCAAGAAGGCGAGCCGCTTACACCTGAGC 1648
.||||||||.|||||.||.||.||.||||||||||||||.||.|||||.|
RBAM_011540__ 1416 GCATCTGATTCATACGAAAGCACAGGAAGGCGAGCCGCTAACGCCTGAAC 1465
BSNT_01930___ 1649 TTCTG-ACAAAGGTCTATTACGACCTGAATAAAAAGTATTTTGGAGACGG 1697
|.||| ||.|| .|.|||||.||.|||||||||||||||||.||.|||..
RBAM_011540__ 1466 TGCTGAACGAA-CTTTATTATGATCTGAATAAAAAGTATTTCGGTGACAA 1514
BSNT_01930___ 1698 CATGGTGATTGATAAGGAAATCGGCCTTGAATGGTCGCGTATTCCGCACT 1747
|||||||||||||||.||||||.|.||.||||||||..|.||||||||.|
RBAM_011540__ 1515 CATGGTGATTGATAAAGAAATCAGTCTGGAATGGTCAAGAATTCCGCATT 1564
BSNT_01930___ 1748 TCTATTACAATTACTATGTGTATCAGTATGCGACAGGGTACAGCGCTGCC 1797
|||||||||||||.|||||||||||.|||||||||||.|||||.||.|||
RBAM_011540__ 1565 TCTATTACAATTATTATGTGTATCAATATGCGACAGGCTACAGTGCGGCC 1614
BSNT_01930___ 1798 CAAGCATTAAGCAGCCAGATTTTGAAGGAAGGAAAGCCGGCGGTTGACCG 1847
|||||..|.|||||||||||.||.||.|||||.|||||.|||||.||.||
RBAM_011540__ 1615 CAAGCGCTGAGCAGCCAGATCTTAAAAGAAGGCAAGCCTGCGGTGGAGCG 1664
BSNT_01930___ 1848 TTATATTGACTTCCTGAAAGCGGGAAGCTCACAATACCCGATTGATGTCC 1897
.||||..||.|||.|.||||||||||||||..||||.|||||.||..|.|
RBAM_011540__ 1665 CTATACCGAATTCTTAAAAGCGGGAAGCTCGGAATATCCGATCGACATAC 1714
BSNT_01930___ 1898 TGAAAAAAGCGGGTGTTGATATGACGTCTCCAGAGCCAATCGAAGCCGCG 1947
|||||||||||||.||.||||||||.||.||.||.||.|||||.||.||.
RBAM_011540__ 1715 TGAAAAAAGCGGGAGTCGATATGACATCGCCTGAACCGATCGAGGCGGCC 1764
BSNT_01930___ 1948 TGCAAAATGTTTGAAGAAAAACTTGATGAAATGGAAGAGCTGCTGATGAA 1997
|||||||||||||||||.|||||..|.||||||||||||||.||...|||
RBAM_011540__ 1765 TGCAAAATGTTTGAAGAGAAACTGAACGAAATGGAAGAGCTTCTTTCGAA 1814
BSNT_01930___ 1998 AGTCAAGCAGTCTTAA 2013
|||.||.|..||.|||
RBAM_011540__ 1815 AGTGAACCCTTCGTAA 1830
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