Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01911 and RBAM_011420
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:39
# Commandline: needle
# -asequence pep-align/BSNT_01911___trpS.1.9828.seq
# -bsequence pep-align/RBAM_011420___trpS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01911___trpS-RBAM_011420___trpS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01911___trpS-RBAM_011420___trpS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01911___trpS
# 2: RBAM_011420___trpS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity: 307/345 (89.0%)
# Similarity: 319/345 (92.5%)
# Gaps: 15/345 ( 4.3%)
# Score: 1578.0
#
#
#=======================================
BSNT_01911___ 1 MSLFYYVLRNEVDVFMKQTIFSGIQPSGSVTLGNYIGAMKQFVELQHDYN 50
||:|||||||||||||||||||||||||:||||||
RBAM_011420__ 1 ---------------MKKTIFSGIQPSGSVTLGNYIGAMKQFVDLQHDYN 35
BSNT_01911___ 51 SYFCIVDQHAITVPQDRLELRKNIRNLAALYLAVGLDPEKATLFIQSEVP 100
.||||||||||||||||||||||||||||||:||||||||||||||||||
RBAM_011420__ 36 GYFCIVDQHAITVPQDRLELRKNIRNLAALYVAVGLDPEKATLFIQSEVP 85
BSNT_01911___ 101 AHAQAGWMMQCVAYIGELERMTQFKDKSKGNEAVVSGLLTYPPLMAADIL 150
||||||||:|||||||||||||||||||||.|||||||||||||||.|||
RBAM_011420__ 86 AHAQAGWMLQCVAYIGELERMTQFKDKSKGKEAVVSGLLTYPPLMAGDIL 135
BSNT_01911___ 151 LYGTDLVPVGEDQKQHLELTRNLAERFNKKYNDIFTIPEVKIPKVGARIM 200
|||||||||||||||||||||||||||||||||||||||||||:.|||||
RBAM_011420__ 136 LYGTDLVPVGEDQKQHLELTRNLAERFNKKYNDIFTIPEVKIPESGARIM 185
BSNT_01911___ 201 SLNDPLKKMSKSDPNQKAYITLLDEPKQLEKKIKSAVTDSEGIVKFDKEN 250
||.||||||||||||||||||||||||||||||||||||||||||:||||
RBAM_011420__ 186 SLADPLKKMSKSDPNQKAYITLLDEPKQLEKKIKSAVTDSEGIVKYDKEN 235
BSNT_01911___ 251 KPGVSNLLTIYSILGNTTIEELEAKYEGKGYGEFKGDLAEVVVNALKPIQ 300
|||||||||||||||||:|||||||||||||||||.||||||:.||.|||
RBAM_011420__ 236 KPGVSNLLTIYSILGNTSIEELEAKYEGKGYGEFKSDLAEVVIGALTPIQ 285
BSNT_01911___ 301 DRYYELIESEELDRILDEGAERANRTANKMLKKMENAMGLGRKRR 345
:||.|||||:||||||||||.|||:||.||:||||||||||||||
RBAM_011420__ 286 ERYRELIESDELDRILDEGAARANKTAGKMVKKMENAMGLGRKRR 330
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